T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51768..73275
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICEVFLIND1_0054 | 47383..48552 | + | 1170 | ACV96514 | restriction modification system DNA specificity domain | - |
| ICEVFLIND1_0055 | 48563..49720 | + | 1158 | ACV96586 | conserved hypothetical protein | - |
| ICEVFLIND1_0058 | 51591..51719 | + | 129 | ACV96593 | conjugative relaxase | - |
| ICEVFLIND1_0059 | 51768..53153 | + | 1386 | ACV96547 | conjugative coupling factor | virb4 |
| ICEVFLIND1_0060 | 53304..53420 | + | 117 | ACV96529 | hypothetical protein | - |
| ICEVFLIND1_0061 | 53436..54953 | + | 1518 | ACV96587 | putative transposase for insertion sequence | - |
| ICEVFLIND1_0062 | 54977..55672 | + | 696 | ACV96594 | conserved hypothetical protein | - |
| ICEVFLIND1_0063 | 55733..56443 | + | 711 | ACV96542 | transposition helper protein | virB11 |
| ICEVFLIND1_0064 | 56480..57043 | - | 564 | ACV96517 | conserved hypothetical protein | - |
| ICEVFLIND1_0065 | 57332..57613 | + | 282 | ACV96589 | type IV conjugative transfer system protein TraL | traL |
| ICEVFLIND1_0066 | 57610..58236 | + | 627 | ACV96567 | sex pilus assembly | traE |
| ICEVFLIND1_0067 | 58220..59116 | + | 897 | ACV96549 | TraK | traK |
| ICEVFLIND1_0070 | 60491..61051 | + | 561 | ACV96511 | sex pilus assembly | traV |
| ICEVFLIND1_0071 | 61048..61434 | + | 387 | ACV96541 | putative pilin subunit | - |
| ICEVFLIND1_0072 | 61612..62445 | + | 834 | ACV96573 | conserved hypothetical protein | - |
| ICEVFLIND1_0075 | 63506..64198 | + | 693 | ACV96525 | DsbC | trbB |
| ICEVFLIND1_0076 | 64198..66597 | + | 2400 | ACV96552 | type-IV secretion system protein TraC | virb4 |
| ICEVFLIND1_0077 | 66656..66937 | + | 282 | ACV96504 | conserved hypothetical protein | - |
| ICEVFLIND1_0078 | 66921..67433 | + | 513 | ACV96568 | conjugation signal peptidase | - |
| ICEVFLIND1_0079 | 67444..68568 | + | 1125 | ACV96595 | sex pilus assembly | traW |
| ICEVFLIND1_0080 | 68546..69580 | + | 1035 | ACV96559 | conjugal transfer protein TraU, putative | traU |
| ICEVFLIND1_0081 | 69583..73275 | + | 3693 | ACV96562 | mating pair stabilization | traN |
| ICEVFLIND1_0082 | 73506..73838 | + | 333 | ACV96566 | hypothetical protein | - |
| ICEVFLIND1_0083 | 73869..74531 | + | 663 | ACV96578 | conserved hypothetical protein | - |
| ICEVFLIND1_0084 | 74622..75224 | - | 603 | ACV96561 | conserved hypothetical protein | - |
| ICEVFLIND1_0085 | 75634..75918 | + | 285 | ACV96590 | conserved hypothetical protein | - |
| ICEVFLIND1_0086 | 75934..76353 | + | 420 | ACV96585 | single-strand binding protein family | - |
| ICEVFLIND1_0087 | 76433..77251 | + | 819 | ACV96540 | phage recombination protein Bet | - |
| ICEVFLIND1_0088 | 77333..77476 | + | 144 | ACV96516 | hypothetical protein | - |