T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 507125..557007
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUBM407_0454 | 502560..503807 | + | 1248 | CAZ55286 | putative permease | - |
| SSUBM407_0456 | 504649..504822 | + | 174 | CAZ55288 | hypothetical protein | - |
| SSUBM407_0457 | 504819..505637 | + | 819 | CAZ55289 | replication initiator protein A protein | - |
| SSUBM407_0458 | 505786..507141 | + | 1356 | CAZ55290 | C-5 cytosine-specific DNA methylase | - |
| SSUBM407_0459 | 507125..507553 | + | 429 | CAZ55291 | hypothetical protein | gbs1369 |
| SSUBM407_0460 | 507564..507947 | + | 384 | CAZ55292 | hypothetical protein | - |
| SSUBM407_0461 | 507950..508189 | + | 240 | CAZ55293 | hypothetical protein | - |
| SSUBM407_0462 | 508192..508776 | + | 585 | CAZ55294 | CAAX amino terminal protease family protein | - |
| SSUBM407_0463 | 508854..509342 | + | 489 | CAZ55295 | hypothetical protein | gbs1365 |
| SSUBM407_0464 | 509342..511159 | + | 1818 | CAZ55296 | putative conjugal transfer protein TraG | virb4 |
| SSUBM407_0465 | 511177..511419 | + | 243 | CAZ55297 | putative membrane protein | prgF |
| SSUBM407_0466 | 511438..512292 | + | 855 | CAZ55298 | putative TrbL/VirB6 plasmid conjugal transfer protein | prgHb |
| SSUBM407_0467 | 512354..512707 | + | 354 | CAZ55299 | putative membrane protein | prgIc |
| SSUBM407_0468 | 512685..515015 | + | 2331 | CAZ55300 | hypothetical protein | virb4 |
| SSUBM407_0469 | 515017..517818 | + | 2802 | CAZ55301 | hypothetical protein | prgK |
| SSUBM407_0470 | 518157..518792 | + | 636 | CAZ55302 | hypothetical protein | - |
| SSUBM407_0471 | 518952..523847 | + | 4896 | CAZ55303 | putative glucan-binding surface-anchored protein | prgB |
| SSUBM407_0471a | 523848..524039 | + | 192 | CAZ55304 | hypothetical protein | - |
| SSUBM407_0472 | 524023..524574 | + | 552 | CAZ55305 | hypothetical protein | gbs1354 |
| SSUBM407_0473 | 524624..531469 | + | 6846 | CAZ55306 | hypothetical protein | - |
| SSUBM407_0474 | 531540..531839 | + | 300 | CAZ55307 | hypothetical protein | - |
| SSUBM407_0475 | 531853..532152 | + | 300 | CAZ55308 | putative membrane protein | gbs1350 |
| SSUBM407_0476 | 532197..533084 | - | 888 | CAZ55309 | integrase | - |
| SSUBM407_0477 | 533176..534126 | + | 951 | CAZ55310 | putative D-alanine--D-alanine ligase | - |
| SSUBM407_0478 | 534107..535402 | - | 1296 | CAZ55311 | hypothetical protein | - |
| SSUBM407_0479 | 535571..536788 | - | 1218 | CAZ55312 | integrase | - |
| SSUBM407_0479a | 536870..537073 | - | 204 | CAZ55313 | excisionase | - |
| SSUBM407_0480 | 537534..537764 | - | 231 | CAZ55314 | hypothetical protein | - |
| SSUBM407_0481 | 537761..538183 | - | 423 | CAZ55315 | putative DNA-binding protein | - |
| SSUBM407_0482 | 538688..539041 | + | 354 | CAZ55316 | DNA-binding protein | - |
| SSUBM407_0483 | 539387..541306 | - | 1920 | CAZ55317 | tetracycline resistance protein TetM 1 | - |
| SSUBM407_0484 | 541683..542615 | - | 933 | CAZ55318 | putative membrane protein | orf13 |
| SSUBM407_0485 | 542612..543613 | - | 1002 | CAZ55319 | putative exported protein | orf14 |
| SSUBM407_0486 | 543610..545787 | - | 2178 | CAZ55320 | putative membrane protein | orf15 |
| SSUBM407_0487 | 545790..548237 | - | 2448 | CAZ55321 | hypothetical protein | virb4 |
| SSUBM407_0488 | 548221..548727 | - | 507 | CAZ55322 | putative membrane protein | orf17a |
| SSUBM407_0489 | 548702..549199 | - | 498 | CAZ55323 | antirestriction protein | - |
| SSUBM407_0490 | 549316..549537 | - | 222 | CAZ55324 | putative membrane protein | orf19 |
| SSUBM407_0491 | 549580..550785 | - | 1206 | CAZ55325 | replication initiation factor | - |
| SSUBM407_0492 | 550963..552348 | - | 1386 | CAZ55326 | FtsK/SpoIIIE family protein | virb4 |
| SSUBM407_0493 | 552377..552763 | - | 387 | CAZ55327 | hypothetical protein | orf23 |
| SSUBM407_0494 | 552779..553093 | - | 315 | CAZ55328 | hypothetical protein | orf23 |
| SSUBM407_0495 | 553409..554452 | - | 1044 | CAZ55329 | hypothetical protein | - |
| SSUBM407_0496 | 554587..555225 | + | 639 | CAZ55330 | putative exported protein | prgL |
| SSUBM407_0497 | 555264..556340 | + | 1077 | CAZ55331 | DNA primase | - |
| SSUBM407_0498 | 556394..556621 | + | 228 | CAZ55332 | hypothetical protein | gbs1347 |
| SSUBM407_0499 | 556618..557007 | + | 390 | CAZ55333 | hypothetical protein | gbs1346 |
| SSUBM407_0500 | 556997..557353 | + | 357 | CAZ55334 | hypothetical protein | - |
| SSUBM407_0501 | 557362..557670 | - | 309 | CAZ55335 | hypothetical protein | - |
| SSUBM407_0502 | 557657..558007 | - | 351 | CAZ55336 | hypothetical protein | - |
| SSUBM407_0503 | 558004..559419 | - | 1416 | CAZ55337 | UmuC-like DNA-repair protein | - |
| SSUBM407_0504 | 559562..560254 | - | 693 | CAZ55338 | putative DNA-binding protein | - |
| SSUBM407_0505 | 561071..561250 | + | 180 | CAZ55339 | bacteriocin | - |