T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33067..52931
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_29 | 28306..28908 | + | 603 | AKA21221 | hypothetical protein | - |
| Locus_30 | 29017..29691 | + | 675 | AKA21222 | Extracellular deoxyribonuclease Dns | - |
| Locus_31 | 29756..30274 | - | 519 | AKA21223 | plasmid-related regulatory protein | - |
| Locus_32 | 30294..32567 | - | 2274 | AKA21224 | plasmid-related membrane protein | - |
| Locus_33 | 33067..36759 | - | 3693 | AKA21225 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_34 | 36762..37790 | - | 1029 | AKA21226 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_35 | 37774..38898 | - | 1125 | AKA21227 | IncF plasmid conjugative transfer pilus assembly protein traW | traW |
| Locus_36 | 38909..39421 | - | 513 | AKA21228 | Conjugative signal peptidase TrhF | - |
| Locus_37 | 39405..39752 | - | 348 | AKA21229 | hypothetical protein | - |
| Locus_38 | 39745..42144 | - | 2400 | AKA21230 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_39 | 42144..42836 | - | 693 | AKA21231 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_40 | 42968..43906 | - | 939 | AKA21232 | Ync protein | - |
| Locus_41 | 43899..44732 | - | 834 | AKA21233 | Ynd protein | - |
| Locus_42 | 44910..45296 | - | 387 | AKA21234 | Conjugative transfer protein TraA | - |
| Locus_43 | 45293..45943 | - | 651 | AKA21235 | Conjugative transfer protein TraV | traV |
| Locus_44 | 45940..47229 | - | 1290 | AKA21236 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_45 | 47232..48128 | - | 897 | AKA21237 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_46 | 48112..48738 | - | 627 | AKA21238 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_47 | 48735..49016 | - | 282 | AKA21239 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_48 | 49305..49892 | + | 588 | AKA21240 | orf49 | - |
| Locus_49 | 49919..50554 | - | 636 | AKA21241 | hypothetical protein | tfc7 |
| Locus_50 | 50541..51101 | - | 561 | AKA21242 | Conjugative transfer protein 234 | - |
| Locus_51 | 51111..52931 | - | 1821 | AKA21243 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_52 | 52980..55130 | - | 2151 | AKA21244 | Conjugative transfer protein TraI, relaxase | - |
| Locus_53 | 55252..55416 | + | 165 | AKA21245 | hypothetical protein | - |
| Locus_54 | 55379..57514 | - | 2136 | AKA21246 | putative DNA helicase | - |