T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38546..62683
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_32 | 34525..35379 | + | 855 | QAY18230 | Mrr restriction system protein | - |
| Locus_33 | 35473..35754 | + | 282 | QAY18231 | hypothetical protein | - |
| Locus_34 | 35754..36227 | + | 474 | QAY18232 | hypothetical protein | - |
| Locus_35 | 36347..38497 | + | 2151 | QAY18233 | conjugal transfer pilus assembly protein TraI | - |
| Locus_36 | 38546..40366 | + | 1821 | QAY18234 | conjugal transfer pilus assembly protein TraD | virb4 |
| Locus_37 | 40376..40936 | + | 561 | QAY18235 | conjugative transfer protein 234 | - |
| Locus_38 | 40914..41558 | + | 645 | QAY18236 | conjugative transfer protein | tfc7 |
| Locus_39 | 41830..43386 | + | 1557 | QAY18237 | transposase/integrase | - |
| Locus_40 | 43546..43794 | + | 249 | QAY18238 | hypothetical protein | - |
| Locus_41 | 43754..45025 | + | 1272 | QAY18239 | Transposase | - |
| Locus_42 | 45101..45796 | + | 696 | QAY18240 | ISPsy4 transposition helper protein | virB11 |
| Locus_43 | 45875..46447 | - | 573 | QAY18241 | DNA helicase family protein | - |
| Locus_44 | 46736..47017 | + | 282 | QAY18242 | conjugative transfer pilus assembly protein TraL | traL |
| Locus_45 | 47014..47640 | + | 627 | QAY18243 | conjugative transfer pilus assembly protein TraE | traE |
| Locus_46 | 47621..48520 | + | 900 | QAY18244 | conjugal transfer pilus assembly protein TraK | traK |
| Locus_47 | 48523..49812 | + | 1290 | QAY18245 | conjugal transfer pilus assembly protein TraB | traB |
| Locus_48 | 49809..50459 | + | 651 | QAY18246 | Conjugative transfer protein TraV | traV |
| Locus_49 | 50456..50842 | + | 387 | QAY18247 | conjugal transfer pilus assembly protein TraA | - |
| Locus_50 | 51020..51853 | + | 834 | QAY18248 | Ynd | - |
| Locus_51 | 51846..52535 | + | 690 | QAY18249 | Ync' | - |
| Locus_52 | 52914..53606 | + | 693 | QAY18250 | disulfide isomerase DsbC | trbB |
| Locus_53 | 53606..56005 | + | 2400 | QAY18251 | conjugal transfer ATP-binding protein TraC | virb4 |
| Locus_54 | 55998..56345 | + | 348 | QAY18252 | hypothetical protein | - |
| Locus_55 | 56329..56841 | + | 513 | QAY18253 | conjugative signal peptidase TrhF | - |
| Locus_56 | 56792..57976 | + | 1185 | QAY18254 | conjugal transfer pilus assembly protein TraW | traW |
| Locus_57 | 57960..58988 | + | 1029 | QAY18255 | conjugal transfer pilus assembly protein TraU | traU |
| Locus_58 | 58991..62683 | + | 3693 | QAY18256 | conjugal transfer mating pair stabilization protein TraN | traN |
| Locus_59 | 62915..63247 | + | 333 | QAY18257 | hypothetical protein | - |
| Locus_60 | 63278..63940 | + | 663 | QAY18258 | Putative glycosylase | - |
| Locus_61 | 64031..64633 | - | 603 | QAY18259 | hypothetical protein | - |
| Locus_62 | 65001..65327 | + | 327 | QAY18260 | hypothetical protein | - |
| Locus_63 | 65343..65762 | + | 420 | QAY18261 | single-stranded DNA-binding protein | - |
| Locus_64 | 65842..66660 | + | 819 | QAY18263 | recombination protein BET | - |