T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 52579..72442
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_36 | 50380..52530 | + | 2151 | WBK56402 | hypothetical protein | - |
| Locus_37 | 52579..54399 | + | 1821 | WBK56403 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_38 | 54409..54969 | + | 561 | WBK56404 | Conjugative transfer protein 234 | - |
| Locus_39 | 54956..55591 | + | 636 | WBK56405 | Conjugative transfer protein s043 | tfc7 |
| Locus_40 | 55618..56205 | - | 588 | WBK56406 | hypothetical protein | - |
| Locus_41 | 56493..56774 | + | 282 | WBK56407 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_42 | 56771..57397 | + | 627 | WBK56408 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_43 | 57378..58277 | + | 900 | WBK56409 | hypothetical protein | traK |
| Locus_44 | 58280..59569 | + | 1290 | WBK56410 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_45 | 59644..60216 | + | 573 | WBK56411 | Conjugative transfer protein TraV | traV |
| Locus_46 | 60213..60599 | + | 387 | WBK56412 | Conjugative transfer protein TraA | - |
| Locus_47 | 60777..61595 | + | 819 | WBK56413 | Ynd | - |
| Locus_48 | 61603..62541 | + | 939 | WBK56414 | Ync | - |
| Locus_49 | 62673..63365 | + | 693 | WBK56415 | hypothetical protein | trbB |
| Locus_50 | 63365..65764 | + | 2400 | WBK56416 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_51 | 65757..66104 | + | 348 | WBK56417 | Conjugative transfer protein 345 | - |
| Locus_52 | 66088..66600 | + | 513 | WBK56418 | Conjugative signal peptidase TrhF | - |
| Locus_53 | 66608..67735 | + | 1128 | WBK56419 | hypothetical protein | traW |
| Locus_54 | 67719..68747 | + | 1029 | WBK56420 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_55 | 68750..72442 | + | 3693 | WBK56421 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_56 | 72533..75199 | - | 2667 | WBK56422 | ATPase involved in DNA repair | - |
| Locus_57 | 75371..76054 | - | 684 | WBK56423 | Endonuclease I precursor | - |
| Locus_58 | 76163..76765 | - | 603 | WBK56424 | hypothetical protein | - |