T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2988974..3016244
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VCD_003684 | 2984772..2984915 | - | 144 | ACQ61840 | hypothetical protein | - |
| VCD_003685 | 2984997..2985815 | - | 819 | ACQ61841 | hypothetical protein | - |
| VCD_003686 | 2985895..2986314 | - | 420 | ACQ61842 | single-stranded DNA-binding protein | - |
| VCD_003687 | 2986330..2986668 | - | 339 | ACQ61843 | hypothetical protein | - |
| VCD_003688 | 2987024..2987626 | + | 603 | ACQ61844 | hypothetical protein | - |
| VCD_003689 | 2987717..2988379 | - | 663 | ACQ61845 | hypothetical protein | - |
| VCD_003690 | 2988410..2988883 | - | 474 | ACQ61846 | hypothetical protein | - |
| VCD_003691 | 2988974..2992615 | - | 3642 | ACQ61847 | IncF plasmid conjugative transfer protein TraN | traN |
| VCD_003692 | 2992669..2993703 | - | 1035 | ACQ61848 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| VCD_003693 | 2993681..2994844 | - | 1164 | ACQ61849 | hypothetical protein | traW |
| VCD_003694 | 2994816..2995328 | - | 513 | ACQ61850 | signal peptidase I | - |
| VCD_003695 | 2995312..2995659 | - | 348 | ACQ61851 | hypothetical protein | - |
| VCD_003696 | 2995652..2998069 | - | 2418 | ACQ61852 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| VCD_003697 | 2998051..2998743 | - | 693 | ACQ61853 | thiol:disulfide interchange protein DsbC | trbB |
| VCD_003698 | 2998888..3000333 | - | 1446 | ACQ61854 | type 4 fimbriae expression regulatory protein pilR | - |
| VCD_003699 | 3000336..3001871 | - | 1536 | ACQ61855 | hypothetical protein | - |
| VCD_003700 | 3001881..3002990 | - | 1110 | ACQ61856 | hypothetical protein | - |
| VCD_003701 | 3002987..3005716 | - | 2730 | ACQ61857 | hypothetical protein | - |
| VCD_003702 | 3006281..3007231 | - | 951 | ACQ61858 | Ync | - |
| VCD_003703 | 3007212..3008045 | - | 834 | ACQ61859 | Ynd | - |
| VCD_003704 | 3008223..3008609 | - | 387 | ACQ61860 | TraA | - |
| VCD_003705 | 3008606..3009256 | - | 651 | ACQ61861 | conjugative transfer protein TraV | traV |
| VCD_003706 | 3009253..3010545 | - | 1293 | ACQ61862 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| VCD_003707 | 3010542..3011444 | - | 903 | ACQ61863 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| VCD_003708 | 3011425..3012051 | - | 627 | ACQ61864 | hypothetical protein | traE |
| VCD_003709 | 3012048..3012335 | - | 288 | ACQ61865 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| VCD_003710 | 3012585..3013205 | + | 621 | ACQ61866 | hypothetical protein | - |
| VCD_003711 | 3013232..3013876 | - | 645 | ACQ61867 | conjugative transfer protein s043 | tfc7 |
| VCD_003712 | 3013854..3014390 | - | 537 | ACQ61868 | hypothetical protein | - |
| VCD_003713 | 3014424..3016244 | - | 1821 | ACQ61869 | TraD | virb4 |
| VCD_003714 | 3016293..3018443 | - | 2151 | ACQ61870 | TraI | - |