T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43242..63107
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_32 | 39301..40071 | + | 771 | QAY18326 | hypothetical protein | - |
| Locus_33 | 40079..40921 | + | 843 | QAY18327 | abortive phage resistance protein | - |
| Locus_34 | 41043..43193 | + | 2151 | QAY18328 | conjugal transfer pilus assembly protein TraI | - |
| Locus_35 | 43242..45062 | + | 1821 | QAY18329 | conjugal transfer pilus assembly protein TraD | virb4 |
| Locus_36 | 45072..45632 | + | 561 | QAY18330 | conjugative transfer protein 234 | - |
| Locus_37 | 45610..46254 | + | 645 | QAY18331 | conjugative transfer protein | tfc7 |
| Locus_38 | 46281..46868 | - | 588 | QAY18332 | DNA helicase family protein | - |
| Locus_39 | 46882..47121 | - | 240 | QAY18333 | plasmid related protein | - |
| Locus_40 | 47157..47438 | + | 282 | QAY18334 | conjugative transfer pilus assembly protein TraL | traL |
| Locus_41 | 47435..48061 | + | 627 | QAY18335 | conjugative transfer pilus assembly protein TraE | traE |
| Locus_42 | 48042..48941 | + | 900 | QAY18336 | conjugal transfer pilus assembly protein TraK | traK |
| Locus_43 | 48944..50233 | + | 1290 | QAY18337 | conjugal transfer pilus assembly protein TraB | traB |
| Locus_44 | 50230..50880 | + | 651 | QAY18338 | Conjugative transfer protein TraV | traV |
| Locus_45 | 50877..51263 | + | 387 | QAY18339 | conjugal transfer pilus assembly protein TraA | - |
| Locus_46 | 51442..52275 | + | 834 | QAY18340 | Ynd | - |
| Locus_47 | 52268..53206 | + | 939 | QAY18341 | Ync | - |
| Locus_48 | 53338..54030 | + | 693 | QAY18342 | disulfide isomerase DsbC | trbB |
| Locus_49 | 54030..56429 | + | 2400 | QAY18343 | conjugal transfer ATP-binding protein TraC | virb4 |
| Locus_50 | 56422..56769 | + | 348 | QAY18344 | hypothetical protein | - |
| Locus_51 | 56753..57265 | + | 513 | QAY18345 | conjugative signal peptidase TrhF | - |
| Locus_52 | 57273..58400 | + | 1128 | QAY18346 | conjugal transfer pilus assembly protein TraW | traW |
| Locus_53 | 58384..59412 | + | 1029 | QAY18347 | conjugal transfer pilus assembly protein TraU | traU |
| Locus_54 | 59415..63107 | + | 3693 | QAY18348 | conjugal transfer mating pair stabilization protein TraN | traN |
| Locus_55 | 63198..64814 | - | 1617 | QAY18349 | SMC domain protein | - |
| Locus_56 | 64894..65649 | - | 756 | QAY18350 | ATP binding domain IstB | - |
| Locus_57 | 65639..67147 | - | 1509 | QAY18351 | integrase catalytic subunit IstA | - |