T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 507125..557007
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUBM407_RS02510 (SSUBM407_0454) | 502560..503807 | + | 1248 | WP_004194760 | ABC transporter permease | - |
| SSUBM407_RS02515 | 503933..504481 | + | 549 | Protein_445 | LLM class flavin-dependent oxidoreductase | - |
| SSUBM407_RS10620 (SSUBM407_0456) | 504649..504822 | + | 174 | WP_012775511 | hypothetical protein | - |
| SSUBM407_RS02520 (SSUBM407_0457) | 504819..505637 | + | 819 | WP_012775512 | replication initiator protein A | - |
| SSUBM407_RS02525 (SSUBM407_0458) | 505786..507141 | + | 1356 | WP_012775513 | DNA (cytosine-5-)-methyltransferase | - |
| SSUBM407_RS02530 (SSUBM407_0459) | 507125..507553 | + | 429 | WP_011922469 | hypothetical protein | gbs1369 |
| SSUBM407_RS02535 (SSUBM407_0460) | 507564..507947 | + | 384 | WP_012775514 | hypothetical protein | - |
| SSUBM407_RS02540 (SSUBM407_0461) | 507956..508189 | + | 234 | WP_024390011 | hypothetical protein | - |
| SSUBM407_RS02545 (SSUBM407_0462) | 508192..508776 | + | 585 | WP_012775516 | CPBP family intramembrane glutamic endopeptidase | - |
| SSUBM407_RS02550 (SSUBM407_0463) | 508854..509342 | + | 489 | WP_002936460 | hypothetical protein | gbs1365 |
| SSUBM407_RS02555 (SSUBM407_0464) | 509342..511159 | + | 1818 | WP_012775517 | VirD4-like conjugal transfer protein, CD1115 family | virb4 |
| SSUBM407_RS02560 (SSUBM407_0465) | 511177..511419 | + | 243 | WP_001072182 | hypothetical protein | prgF |
| SSUBM407_RS02565 (SSUBM407_0466) | 511438..512292 | + | 855 | WP_012775518 | conjugal transfer protein TrbL | prgHb |
| SSUBM407_RS02570 (SSUBM407_0467) | 512354..512707 | + | 354 | WP_012775519 | PrgI family protein | prgIc |
| SSUBM407_RS02575 (SSUBM407_0468) | 512664..515015 | + | 2352 | WP_044682503 | VirB4-like conjugal transfer ATPase, CD1110 family | virb4 |
| SSUBM407_RS02580 (SSUBM407_0469) | 515017..517818 | + | 2802 | WP_012775521 | phage tail tip lysozyme | prgK |
| SSUBM407_RS02585 (SSUBM407_0470) | 518157..518792 | + | 636 | WP_000222716 | hypothetical protein | - |
| SSUBM407_RS02590 (SSUBM407_0471) | 518952..523847 | + | 4896 | WP_012775522 | SspB-related isopeptide-forming adhesin | prgB |
| SSUBM407_RS02595 (SSUBM407_0471a) | 523848..524039 | + | 192 | WP_001068448 | calcium-binding protein | - |
| SSUBM407_RS02600 (SSUBM407_0472) | 524023..524574 | + | 552 | WP_012775523 | hypothetical protein | gbs1354 |
| SSUBM407_RS02605 (SSUBM407_0473) | 524624..531469 | + | 6846 | WP_012775524 | SNF2-related protein | - |
| SSUBM407_RS02610 (SSUBM407_0474) | 531540..531839 | + | 300 | WP_012775525 | DUF5962 family protein | - |
| SSUBM407_RS02615 (SSUBM407_0475) | 531853..532152 | + | 300 | WP_012775526 | DUF5966 family protein | gbs1350 |
| SSUBM407_RS02620 (SSUBM407_0476) | 532197..533084 | - | 888 | WP_012775527 | tyrosine-type recombinase/integrase | - |
| SSUBM407_RS02625 (SSUBM407_0477) | 533176..534126 | + | 951 | WP_012775528 | ATP-grasp domain-containing protein | - |
| SSUBM407_RS02630 (SSUBM407_0478) | 534107..535402 | - | 1296 | WP_012775529 | hypothetical protein | - |
| SSUBM407_RS02635 (SSUBM407_0479) | 535571..536788 | - | 1218 | WP_001291561 | tyrosine-type recombinase/integrase | - |
| SSUBM407_RS02640 (SSUBM407_0479a) | 536870..537073 | - | 204 | WP_000814511 | excisionase | - |
| SSUBM407_RS10700 | 537057..537308 | + | 252 | WP_001845478 | hypothetical protein | - |
| SSUBM407_RS02645 (SSUBM407_0480) | 537534..537764 | - | 231 | WP_000857133 | helix-turn-helix domain-containing protein | - |
| SSUBM407_RS02650 (SSUBM407_0481) | 537761..538183 | - | 423 | WP_000804885 | sigma-70 family RNA polymerase sigma factor | - |
| SSUBM407_RS02655 (SSUBM407_0482) | 538688..539041 | + | 354 | WP_001227347 | helix-turn-helix transcriptional regulator | - |
| SSUBM407_RS02660 | 539101..539268 | - | 168 | WP_000336323 | cysteine-rich KTR domain-containing protein | - |
| SSUBM407_RS02665 (SSUBM407_0483) | 539387..541306 | - | 1920 | WP_002371500 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| SSUBM407_RS02670 | 541322..541438 | - | 117 | WP_001791010 | tetracycline resistance determinant leader peptide | - |
| SSUBM407_RS02675 (SSUBM407_0484) | 541683..542615 | - | 933 | WP_001224318 | conjugal transfer protein | orf13 |
| SSUBM407_RS02680 (SSUBM407_0485) | 542612..543613 | - | 1002 | WP_000769868 | bifunctional lysozyme/C40 family peptidase | orf14 |
| SSUBM407_RS02685 (SSUBM407_0486) | 543610..545787 | - | 2178 | WP_000804748 | membrane protein | orf15 |
| SSUBM407_RS02690 (SSUBM407_0487) | 545790..548237 | - | 2448 | WP_000331160 | ATP-binding protein | virb4 |
| SSUBM407_RS02695 (SSUBM407_0488) | 548221..548613 | - | 393 | WP_000723888 | conjugal transfer protein | orf17a |
| SSUBM407_RS02700 (SSUBM407_0489) | 548702..549199 | - | 498 | WP_000342539 | antirestriction protein ArdA | - |
| SSUBM407_RS02705 (SSUBM407_0490) | 549316..549537 | - | 222 | WP_001009056 | hypothetical protein | orf19 |
| SSUBM407_RS02710 (SSUBM407_0491) | 549580..550785 | - | 1206 | WP_000398284 | MobT family relaxase | - |
| SSUBM407_RS02715 | 550808..550960 | - | 153 | WP_000879507 | hypothetical protein | - |
| SSUBM407_RS02720 (SSUBM407_0492) | 550963..552348 | - | 1386 | WP_000813488 | FtsK/SpoIIIE domain-containing protein | virb4 |
| SSUBM407_RS02725 (SSUBM407_0493) | 552377..552763 | - | 387 | WP_000985015 | YdcP family protein | orf23 |
| SSUBM407_RS02730 (SSUBM407_0494) | 552779..553093 | - | 315 | WP_000420682 | YdcP family protein | orf23 |
| SSUBM407_RS02735 (SSUBM407_0495) | 553409..554452 | - | 1044 | WP_012775530 | hypothetical protein | - |
| SSUBM407_RS02740 (SSUBM407_0496) | 554587..555225 | + | 639 | WP_012775531 | hypothetical protein | prgL |
| SSUBM407_RS02745 (SSUBM407_0497) | 555264..556340 | + | 1077 | WP_012775532 | toprim domain-containing protein | - |
| SSUBM407_RS02750 (SSUBM407_0498) | 556394..556621 | + | 228 | WP_012775533 | DUF5965 family protein | gbs1347 |
| SSUBM407_RS02755 (SSUBM407_0499) | 556618..557007 | + | 390 | WP_012775534 | DUF5945 family protein | gbs1346 |
| SSUBM407_RS02760 (SSUBM407_0500) | 557057..557353 | + | 297 | WP_044682494 | hypothetical protein | - |
| SSUBM407_RS02765 (SSUBM407_0501) | 557362..557670 | - | 309 | WP_012775536 | DUF5960 family protein | - |
| SSUBM407_RS02770 (SSUBM407_0502) | 557657..558007 | - | 351 | WP_012775537 | hypothetical protein | - |
| SSUBM407_RS02775 (SSUBM407_0503) | 558004..559419 | - | 1416 | WP_012775538 | Y-family DNA polymerase | - |
| SSUBM407_RS02780 (SSUBM407_0504) | 559562..560254 | - | 693 | WP_012775539 | XRE family transcriptional regulator | - |
| SSUBM407_RS02785 | 560670..560951 | + | 282 | WP_228475338 | hypothetical protein | - |
| SSUBM407_RS02790 (SSUBM407_0505) | 561071..561250 | + | 180 | WP_012775540 | Blp family class II bacteriocin | - |