T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45327..69464
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICEVflInd1_042 | 41107..42297 | + | 1191 | AIP92400 | hypothetical protein | - |
| ICEVflInd1_043 | 42298..43011 | + | 714 | AIP92401 | hypothetical protein | - |
| ICEVflInd1_044 | 43128..45278 | + | 2151 | AIP92402 | conjugative transfer protein TraI | - |
| ICEVflInd1_045 | 45327..47147 | + | 1821 | AIP92403 | IncF plasmid conjugative transfer protein TraD | virb4 |
| ICEVflInd1_046 | 47157..47717 | + | 561 | AIP92404 | hypothetical protein | - |
| ICEVflInd1_047 | 47704..48339 | + | 636 | AIP92405 | conjugative transfer protein traJ | tfc7 |
| ICEVflInd1_048 | 48632..50167 | + | 1536 | AIP92406 | integrase catalytic subunit | - |
| ICEVflInd1_049 | 50327..50575 | + | 249 | AIP92407 | hypothetical protein | - |
| ICEVflInd1_050 | 50535..51806 | + | 1272 | AIP92408 | hypothetical protein | - |
| ICEVflInd1_051 | 51882..52577 | + | 696 | AIP92409 | mobile element protein | virB11 |
| ICEVflInd1_052 | 52656..53228 | - | 573 | AIP92410 | hypothetical protein | - |
| ICEVflInd1_054 | 53517..53798 | + | 282 | AIP92411 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| ICEVflInd1_055 | 53795..54421 | + | 627 | AIP92412 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| ICEVflInd1_056 | 54405..55301 | + | 897 | AIP92413 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| ICEVflInd1_057 | 55304..56593 | + | 1290 | AIP92414 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| ICEVflInd1_058 | 56590..57240 | + | 651 | AIP92415 | conjugative transfer protein TraV | traV |
| ICEVflInd1_059 | 57237..57623 | + | 387 | AIP92416 | conjugative transfer protein TraA putative pilin subunit | - |
| ICEVflInd1_060 | 57801..58634 | + | 834 | AIP92417 | Ynd | - |
| ICEVflInd1_063 | 59695..60387 | + | 693 | AIP92418 | thiol disulfide | trbB |
| ICEVflInd1_064 | 60387..62786 | + | 2400 | AIP92419 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| ICEVflInd1_065 | 62779..63126 | + | 348 | AIP92420 | hypothetical protein | - |
| ICEVflInd1_066 | 63110..63622 | + | 513 | AIP92421 | conjugative signal peptidase TrhF | - |
| ICEVflInd1_067 | 63633..64757 | + | 1125 | AIP92422 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| ICEVflInd1_068 | 64741..65769 | + | 1029 | AIP92423 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| ICEVflInd1_069 | 65772..69464 | + | 3693 | AIP92424 | IncF plasmid conjugative transfer protein TraN | traN |
| ICEVflInd1_070 | 69695..70027 | + | 333 | AIP92425 | hypothetical protein | - |
| ICEVflInd1_071 | 70058..70720 | + | 663 | AIP92426 | hypothetical protein | - |
| ICEVflInd1_072 | 70811..71413 | - | 603 | AIP92427 | hypothetical protein | - |
| ICEVflInd1_073 | 71781..72107 | + | 327 | AIP92428 | hypothetical protein | - |
| ICEVflInd1_074 | 72123..72542 | + | 420 | AIP92429 | single-stranded DNA-binding protein | - |
| ICEVflInd1_075 | 72622..73440 | + | 819 | AIP92430 | recombination protein BET | - |
| ICEVflInd1_076 | 73522..73665 | + | 144 | AIP92431 | hypothetical protein | - |