T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51620..73679
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC53638_RS27530 (Ec53638_A0076) | 47111..47545 | + | 435 | WP_000845938 | conjugation system SOS inhibitor PsiB | - |
| EC53638_RS27535 (Ec53638_A0077) | 47542..48261 | + | 720 | WP_000116339 | plasmid SOS inhibition protein A | - |
| EC53638_RS27540 (Ec53638_A0078) | 48261..48779 | + | 519 | WP_001178555 | hypothetical protein | - |
| EC53638_RS32820 | 48897..49049 | + | 153 | Protein_61 | DUF5431 family protein | - |
| EC53638_RS27550 (Ec53638_A0079) | 48994..49116 | + | 123 | WP_223200913 | Hok/Gef family protein | - |
| EC53638_RS30300 | 49541..49796 | - | 256 | Protein_63 | hypothetical protein | - |
| EC53638_RS27565 (Ec53638_A0083) | 50097..50384 | + | 288 | WP_000107525 | hypothetical protein | - |
| EC53638_RS27570 (Ec53638_A0084) | 50503..51324 | + | 822 | WP_001234488 | DUF932 domain-containing protein | - |
| EC53638_RS27575 (Ec53638_A0086) | 51620..52210 | - | 591 | WP_000252679 | transglycosylase SLT domain-containing protein | virB1 |
| EC53638_RS27580 (Ec53638_A0087) | 52545..52928 | + | 384 | WP_024174439 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EC53638_RS27585 (Ec53638_A0088) | 53062..53793 | + | 732 | WP_248698826 | conjugal transfer transcriptional regulator TraJ | - |
| EC53638_RS30310 (Ec53638_A0089) | 53930..54157 | + | 228 | WP_000089265 | conjugal transfer relaxosome protein TraY | - |
| EC53638_RS27590 (Ec53638_A0090) | 54190..54555 | + | 366 | WP_000991525 | type IV conjugative transfer system pilin TraA | - |
| EC53638_RS27595 (Ec53638_A0091) | 54570..54881 | + | 312 | WP_000012118 | type IV conjugative transfer system protein TraL | traL |
| EC53638_RS27600 (Ec53638_A0092) | 54903..55469 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| EC53638_RS27605 (Ec53638_A0093) | 55456..56184 | + | 729 | WP_001230815 | type-F conjugative transfer system secretin TraK | traK |
| EC53638_RS27610 (Ec53638_A0094) | 56184..57611 | + | 1428 | WP_000146660 | F-type conjugal transfer pilus assembly protein TraB | traB |
| EC53638_RS27615 (Ec53638_A0095) | 57601..58191 | + | 591 | WP_000002786 | conjugal transfer pilus-stabilizing protein TraP | - |
| EC53638_RS27620 (Ec53638_A0096) | 58178..58402 | + | 225 | WP_001057277 | hypothetical protein | - |
| EC53638_RS27625 (Ec53638_A0097) | 58399..58914 | + | 516 | WP_000724024 | type IV conjugative transfer system lipoprotein TraV | traV |
| EC53638_RS30315 (Ec53638_A0098) | 59049..59309 | + | 261 | WP_001278691 | conjugal transfer protein TraR | - |
| EC53638_RS27635 (Ec53638_A0099) | 59435..62065 | + | 2631 | WP_001063854 | type IV secretion system protein TraC | virb4 |
| EC53638_RS27640 (Ec53638_A0100) | 62062..62448 | + | 387 | WP_000213409 | type-F conjugative transfer system protein TrbI | - |
| EC53638_RS27645 (Ec53638_A0101) | 62445..63077 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| EC53638_RS27650 (Ec53638_A0102) | 63074..64066 | + | 993 | WP_000830845 | conjugal transfer pilus assembly protein TraU | traU |
| EC53638_RS27655 (Ec53638_A0103) | 64096..64401 | + | 306 | WP_000224419 | hypothetical protein | - |
| EC53638_RS27660 (Ec53638_A0104) | 64410..65048 | + | 639 | WP_001080251 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| EC53638_RS27665 (Ec53638_A0105) | 65045..66853 | + | 1809 | WP_000821842 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| EC53638_RS27670 (Ec53638_A0106) | 66880..67137 | + | 258 | WP_000864339 | conjugal transfer protein TrbE | - |
| EC53638_RS27675 (Ec53638_A0107) | 67130..67873 | + | 744 | WP_001030382 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| EC53638_RS27680 (Ec53638_A0108) | 67889..68236 | + | 348 | WP_001287902 | conjugal transfer protein TrbA | - |
| EC53638_RS27685 (Ec53638_A0109) | 68355..68639 | + | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EC53638_RS27690 (Ec53638_A0110) | 68626..69171 | + | 546 | WP_000052619 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| EC53638_RS27695 (Ec53638_A0111) | 69101..69463 | + | 363 | WP_001443292 | P-type conjugative transfer protein TrbJ | - |
| EC53638_RS27700 (Ec53638_A0112) | 69463..70836 | + | 1374 | WP_024174425 | conjugal transfer pilus assembly protein TraH | traH |
| EC53638_RS27705 (Ec53638_A0010) | 70833..73679 | + | 2847 | WP_001007043 | conjugal transfer mating-pair stabilization protein TraG | traG |
| EC53638_RS27710 (Ec53638_A0011) | 73676..74185 | + | 510 | WP_000628109 | conjugal transfer entry exclusion protein TraS | - |
| EC53638_RS27715 (Ec53638_A0012) | 74199..74984 | + | 786 | WP_000850431 | hypothetical protein | - |