T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31545..51409
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_29 | 26784..27386 | + | 603 | ALP44338 | hypothetical protein | - |
| Locus_30 | 27495..28169 | + | 675 | ALP44339 | extracellular deoxyribonuclease dns | - |
| Locus_31 | 28234..28752 | - | 519 | ALP44340 | plasmid-related regulatory protein | - |
| Locus_32 | 28772..31045 | - | 2274 | ALP44341 | plasmid-related membrane protein | - |
| Locus_33 | 31545..35237 | - | 3693 | ALP44342 | plasmid conjugative transfer protein | traN |
| Locus_34 | 35240..36268 | - | 1029 | ALP44343 | plasmid conjugative transfer pilus assembly protein trau | traU |
| Locus_35 | 36252..37376 | - | 1125 | ALP44344 | plasmid conjugative transfer pilus assembly protein traw | traW |
| Locus_36 | 37387..37899 | - | 513 | ALP44345 | conjugative signal peptidase | - |
| Locus_37 | 37883..38230 | - | 348 | ALP44346 | hypothetical protein | - |
| Locus_38 | 38223..40622 | - | 2400 | ALP44347 | plasmid conjugative transfer pilus assembly protein trac | virb4 |
| Locus_39 | 40622..41314 | - | 693 | ALP44348 | thiol:disulfide protein | trbB |
| Locus_40 | 41446..42384 | - | 939 | ALP44349 | ync | - |
| Locus_41 | 42377..43210 | - | 834 | ALP44350 | ynd | - |
| Locus_42 | 43388..43774 | - | 387 | ALP44351 | conjugative transfer protein | - |
| Locus_43 | 43771..44421 | - | 651 | ALP44352 | conjugative transfer protein | traV |
| Locus_44 | 44418..45707 | - | 1290 | ALP44353 | plasmid conjugative transfer pilus assembly protein trab | traB |
| Locus_45 | 45710..46606 | - | 897 | ALP44354 | plasmid conjugative transfer pilus assembly protein trak | traK |
| Locus_46 | 46590..47216 | - | 627 | ALP44355 | plasmid conjugative transfer pilus assembly protein trae | traE |
| Locus_47 | 47213..47494 | - | 282 | ALP44356 | plasmid conjugative transfer pilus assembly protein tral | traL |
| Locus_48 | 47783..48370 | + | 588 | ALP44357 | plasmid relative protein | - |
| Locus_49 | 48397..49032 | - | 636 | ALP44358 | conjugative transfer protein | tfc7 |
| Locus_50 | 49019..49579 | - | 561 | ALP44359 | conjugative transfer protein | - |
| Locus_51 | 49589..51409 | - | 1821 | ALP44360 | plasmid conjugative transfer protein | virb4 |
| Locus_52 | 51458..53608 | - | 2151 | ALP44361 | conjugative transfer protein relaxase | - |
| Locus_53 | 53730..53894 | + | 165 | ALP44362 | hypothetical protein | - |
| Locus_54 | 53857..55992 | - | 2136 | ALP44363 | putative DNA helicase | - |