T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 29832..49882
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ICEValHN396_018 | 25251..27386 | + | 2136 | ALF35044 | Putative DNA helicase | - |
| ICEValHN396_019 | 27634..29784 | + | 2151 | ALF35047 | Conjugative transfer protein, TraI | - |
| ICEValHN396_020 | 29832..31667 | + | 1836 | ALF35032 | Conjugative transfer protein, TraD | virb4 |
| ICEValHN396_021 | 31677..32237 | + | 561 | ALF35068 | Conjugative transfer protein, S091 | - |
| ICEValHN396_022 | 32224..32859 | + | 636 | ALF35013 | Conjugative transfer protein, TraJ | tfc7 |
| ICEValHN396_023 | 32997..34103 | + | 1107 | ALF35059 | Fic family protein | - |
| ICEValHN396_024 | 34159..34293 | - | 135 | ALF35075 | Hypothetical protein | - |
| ICEValHN396_025 | 34299..34595 | - | 297 | ALF35007 | HigA protein | - |
| ICEValHN396_026 | 34829..35110 | + | 282 | ALF35048 | Conjugative transfer pilus assembly protein, TraL | traL |
| ICEValHN396_027 | 35119..35733 | + | 615 | ALF35025 | Conjugative transfer pilus assembly protein, TraE | traE |
| ICEValHN396_028 | 35717..36613 | + | 897 | ALF35080 | Conjugative transfer pilus assembly protein, TraK | traK |
| ICEValHN396_029 | 36616..37905 | + | 1290 | ALF35076 | Conjugative transfer pilus assembly protein, TraB | traB |
| ICEValHN396_030 | 37902..38552 | + | 651 | ALF35079 | Conjugative transfer protein, TraV | traV |
| ICEValHN396_031 | 38549..38935 | + | 387 | ALF35010 | Conjugative transfer protein, TraA | - |
| ICEValHN396_032 | 38976..39482 | - | 507 | ALF35017 | Acetyltransferase | - |
| ICEValHN396_033 | 39473..39739 | - | 267 | ALF35035 | Hypothetical protein | - |
| ICEValHN396_034 | 40109..40801 | + | 693 | ALF35056 | Thiol:disulfide involved in conjugative transfer, dsbC | trbB |
| ICEValHN396_035 | 40802..43204 | + | 2403 | ALF35030 | Conjugative transfer pilus assembly protein, TraC | virb4 |
| ICEValHN396_036 | 43197..43544 | + | 348 | ALF35028 | Conjugative transfer protein 345 | - |
| ICEValHN396_037 | 43528..44040 | + | 513 | ALF35053 | Conjugative signal peptidase, TrhF | - |
| ICEValHN396_038 | 44051..45175 | + | 1125 | ALF35081 | Conjugative transfer pilus assembly protein, TraW | traW |
| ICEValHN396_039 | 45159..46187 | + | 1029 | ALF35012 | Conjugative transfer protein, TraU | traU |
| ICEValHN396_040 | 46190..49882 | + | 3693 | ALF35065 | Conjugative transfer protein, TraN | traN |
| ICEValHN396_041 | 50579..50818 | + | 240 | ALF35034 | Hypothetical protein | - |
| ICEValHN396_042 | 50961..51554 | + | 594 | ALF35064 | ATP-binding protein | - |
| ICEValHN396_043 | 51759..52163 | + | 405 | ALF35051 | putative transcriptional regulator | - |
| ICEValHN396_044 | 52477..54027 | + | 1551 | ALF35069 | Aerotaxis sensor receptor protein | - |