T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 585695..599749
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD630_04910 (CD0491) | 581655..582062 | + | 408 | CAJ67320 | PTS system, mannose/fructose/sorbose IIA component | - |
| CD630_04920 (CD0492) | 582091..582564 | + | 474 | CAJ67321 | PTS system, mannose/fructose/sorbose IIB component | - |
| CD630_04930 (CD0493) | 582611..583369 | + | 759 | CAJ67322 | PTS system, mannose/fructose/sorbose IIC component | - |
| CD630_04940 (CD0494) | 583393..584232 | + | 840 | CAJ67323 | PTS system, mannose/fructose/sorbose IID component | - |
| CD630_04960 (CD0496) | 585695..586009 | + | 315 | CAJ67325 | putative conjugative transposon protein DUF961 family Tn5397, CTn3-Orf23 | orf23 |
| CD630_04970 (CD0497) | 586031..586417 | + | 387 | CAJ67326 | putative conjugative transposon protein DUF961 family Tn5397, CTn3-Orf22 | orf23 |
| CD630_04980 (CD0498) | 586451..587836 | + | 1386 | CAJ67327 | putative cell-division FtsK/SpoIIIE-family protein Tn5397, CTn3-Orf21 | virb4 |
| CD630_04981 (CD0498A) | 587839..587991 | + | 153 | CAJ67328 | putative conjugative transposon protein Tn5397,CTn3-Orf20.1 | - |
| CD630_04990 (CD0499) | 588010..589218 | + | 1209 | CAJ67329 | putative replication initiation factor Tn5397,CTn3-Orf20 | - |
| CD630_04991 (CD0499A) | 589261..589482 | + | 222 | CAJ67330 | putative conjugative transposon protein Tn5397,CTn3-Orf19 | orf19 |
| CD630_05000 (CD0500) | 589599..590096 | + | 498 | CAJ67331 | putative antirestriction protein Tn5397,CTn3-Orf18 | - |
| CD630_05010 (CD0501) | 590184..590576 | + | 393 | CAJ67332 | putative conjugative transposon protein Tn5397,CTn3-Orf17 | orf17a |
| CD630_05020 (CD0502) | 590560..593007 | + | 2448 | CAJ67333 | putative ATPase Tn5397, CTn3-Orf16 | virb4 |
| CD630_05030 (CD0503) | 593007..595175 | + | 2169 | CAJ67334 | putative membrane protein Tn5397, CTn3-Orf15 | orf15 |
| CD630_05040 (CD0504) | 595172..598820 | + | 3649 | Protein_529 | Fragment of putative conjugative transposon protein Tn5397, CTn3-Orf14 | - |
| CD630_05060 (CD0506) | 596830..598659 | + | 1830 | CAJ67336 | Reverse transcriptase/maturase/endonuclease,Group II intron | - |
| CD630_05070 (CD0507) | 598817..599749 | + | 933 | CAJ67337 | putative conjugative transposon protein Tn5397,CTn3-Orf13 | orf13 |
| CD630_05071 (CD0507A) | 599962..600018 | + | 57 | Protein_532 | Fragment of Tet(M) leader peptide Tn5397,CTn3-orf12 (C-terminal region) | - |
| CD630_05080 (CD0508) | 600034..601953 | + | 1920 | CAJ67339 | Tetracycline resistance protein Tn5397 | - |
| CD630_05081 (CD0508A) | 602049..602243 | + | 195 | CAJ67340 | putative conjugative transposon protein Tn5397,CTn3-Orf6 | - |
| CD630_05090 (CD0509) | 602302..602655 | - | 354 | CAJ67341 | Transcriptional regulator, HTH-type Tn5397,CTn3-Orf9 | - |
| CD630_05091 (CD0509A) | 602866..602931 | + | 66 | CAJ67342 | putative conjugative transposon protein Tn5397,CTn3-Orf10 | - |
| CD630_05100 (CD0510) | 603157..603582 | + | 426 | CAJ67343 | putative RNA polymerase sigma factor Tn5397,CTn3-Orf7 | - |
| CD630_05101 (CD0510A) | 603579..603809 | + | 231 | CAJ67344 | putative conjugative transposon protein Tn5397,CTn3-Orf8 | - |
| CD630_05102 (CD0510B) | 603931..604068 | - | 138 | Protein_539 | Fragment of putative conjugative transposon protein Tn5397, CTn3-Orf5 (C-terminal region) | - |
| CD630_05103 (CD0510C) | 604190..604330 | + | 141 | CCA62796 | putative conjugative transposon protein Tn5397,CTn3-Orf4 | - |