T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42011..66155
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_34 | 37990..38844 | + | 855 | APO16685 | Mrr restriction system protein | - |
| Locus_35 | 38938..39219 | + | 282 | APO16686 | hypothetical protein | - |
| Locus_36 | 39219..39692 | + | 474 | APO16687 | hypothetical protein | - |
| Locus_37 | 39812..41962 | + | 2151 | APO16688 | Conjugative transfer protein TraI, relaxase | - |
| Locus_38 | 42011..43831 | + | 1821 | APO16689 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_39 | 43841..44401 | + | 561 | APO16690 | Conjugative transfer protein 234 | - |
| Locus_40 | 44388..45023 | + | 636 | APO16691 | Conjugative transfer protein s043 | tfc7 |
| Locus_41 | 45295..46851 | + | 1557 | APO16692 | Mobile element protein | - |
| Locus_42 | 47016..47264 | + | 249 | APO16693 | hypothetical protein | - |
| Locus_43 | 47224..48495 | + | 1272 | APO16694 | hypothetical protein | - |
| Locus_44 | 48571..49266 | + | 696 | APO16695 | Mobile element protein | virB11 |
| Locus_45 | 49345..49917 | - | 573 | APO16696 | hypothetical protein | - |
| Locus_46 | 50206..50487 | + | 282 | APO16697 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_47 | 50484..51110 | + | 627 | APO16698 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_48 | 51094..51990 | + | 897 | APO16699 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_49 | 51993..53282 | + | 1290 | APO16700 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_50 | 53279..53929 | + | 651 | APO16701 | Conjugative transfer protein TraV | traV |
| Locus_51 | 53926..54312 | + | 387 | APO16702 | Conjugative transfer protein TraA | - |
| Locus_52 | 54490..55323 | + | 834 | APO16703 | Ynd | - |
| Locus_53 | 55316..56254 | + | 939 | APO16704 | Ync | - |
| Locus_54 | 56386..57078 | + | 693 | APO16705 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_55 | 57078..59477 | + | 2400 | APO16706 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_56 | 59470..59817 | + | 348 | APO16707 | Conjugative transfer protein 345 | - |
| Locus_57 | 59801..60313 | + | 513 | APO16708 | Conjugative signal peptidase TrhF | - |
| Locus_58 | 60324..61448 | + | 1125 | APO16709 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_59 | 61432..62460 | + | 1029 | APO16710 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_60 | 62463..66155 | + | 3693 | APO16711 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_61 | 66387..66719 | + | 333 | APO16712 | hypothetical protein | - |
| Locus_62 | 66750..67412 | + | 663 | APO16713 | hypothetical protein | - |
| Locus_63 | 67503..68105 | - | 603 | APO16714 | hypothetical protein | - |
| Locus_64 | 68473..68799 | + | 327 | APO16715 | hypothetical protein | - |
| Locus_65 | 68815..69234 | + | 420 | APO16716 | Single-stranded DNA-binding protein | - |
| Locus_66 | 69314..70132 | + | 819 | APO16717 | Recombination protein BET | - |
| Locus_67 | 70214..70357 | + | 144 | APO16718 | hypothetical protein | - |