T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39966..63744
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_35 | 35945..36799 | + | 855 | APO17487 | Mrr restriction system protein | - |
| Locus_36 | 36893..37174 | + | 282 | APO17488 | hypothetical protein | - |
| Locus_37 | 37174..37647 | + | 474 | APO17489 | hypothetical protein | - |
| Locus_38 | 37767..39917 | + | 2151 | APO17490 | Conjugative transfer protein TraI, relaxase | - |
| Locus_39 | 39966..41786 | + | 1821 | APO17491 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_40 | 41796..42356 | + | 561 | APO17492 | Conjugative transfer protein 234 | - |
| Locus_41 | 42343..42978 | + | 636 | APO17493 | Conjugative transfer protein s043 | tfc7 |
| Locus_42 | 43005..43592 | - | 588 | APO17494 | hypothetical protein | - |
| Locus_43 | 43881..44162 | + | 282 | APO17495 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_44 | 44159..44785 | + | 627 | APO17496 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_45 | 44769..45665 | + | 897 | APO17497 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_46 | 45668..46957 | + | 1290 | APO17498 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_47 | 47032..47604 | + | 573 | APO17499 | Conjugative transfer protein TraV | traV |
| Locus_48 | 47601..47987 | + | 387 | APO17500 | Conjugative transfer protein TraA | - |
| Locus_49 | 48166..48999 | + | 834 | APO17501 | Ynd | - |
| Locus_50 | 48992..49930 | + | 939 | APO17502 | Ync | - |
| Locus_51 | 50062..50754 | + | 693 | APO17503 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_52 | 50754..53153 | + | 2400 | APO17504 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_53 | 53146..53493 | + | 348 | APO17505 | Conjugative transfer protein 345 | - |
| Locus_54 | 53477..53989 | + | 513 | APO17506 | Conjugative signal peptidase TrhF | - |
| Locus_55 | 54000..55124 | + | 1125 | APO17507 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_56 | 55156..56136 | + | 981 | APO17508 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_57 | 56139..59831 | + | 3693 | APO17509 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_58 | 60290..61708 | + | 1419 | APO17510 | hypothetical protein | - |
| Locus_59 | 61705..63744 | + | 2040 | APO17511 | Bipolar DNA helicase HerA | virb4 |
| Locus_60 | 63990..64103 | + | 114 | APO17512 | hypothetical protein | - |
| Locus_61 | 64153..64866 | - | 714 | APO17513 | Endonuclease I precursor | - |
| Locus_62 | 64869..65321 | - | 453 | APO17514 | Il-IS_2, transposase | - |
| Locus_63 | 66070..66582 | - | 513 | APO17515 | Lipoprotein signal peptidase | - |
| Locus_64 | 66586..67365 | - | 780 | APO17516 | Cobalt-zinc-cadmium resistance protein CzcD | - |
| Locus_65 | 67578..67985 | + | 408 | APO17517 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| Locus_66 | 68139..68261 | + | 123 | APO17518 | hypothetical protein | - |
| Locus_67 | 68273..68494 | - | 222 | APO17519 | hypothetical protein | - |