T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39966..63744
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_37 | 35945..36799 | + | 855 | APO17390 | Mrr restriction system protein | - |
| Locus_38 | 36893..37174 | + | 282 | APO17391 | hypothetical protein | - |
| Locus_39 | 37174..37647 | + | 474 | APO17392 | hypothetical protein | - |
| Locus_40 | 37767..39917 | + | 2151 | APO17393 | Conjugative transfer protein TraI, relaxase | - |
| Locus_41 | 39966..41786 | + | 1821 | APO17394 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_42 | 41796..42356 | + | 561 | APO17395 | Conjugative transfer protein 234 | - |
| Locus_43 | 42343..42978 | + | 636 | APO17396 | Conjugative transfer protein s043 | tfc7 |
| Locus_44 | 43005..43592 | - | 588 | APO17397 | hypothetical protein | - |
| Locus_45 | 43881..44162 | + | 282 | APO17398 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_46 | 44159..44785 | + | 627 | APO17399 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_47 | 44769..45665 | + | 897 | APO17400 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_48 | 45668..46957 | + | 1290 | APO17401 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_49 | 47032..47604 | + | 573 | APO17402 | Conjugative transfer protein TraV | traV |
| Locus_50 | 47601..47987 | + | 387 | APO17403 | Conjugative transfer protein TraA | - |
| Locus_51 | 48166..48999 | + | 834 | APO17404 | Ynd | - |
| Locus_52 | 48992..49930 | + | 939 | APO17405 | Ync | - |
| Locus_53 | 50062..50754 | + | 693 | APO17406 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_54 | 50754..53153 | + | 2400 | APO17407 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_55 | 53146..53493 | + | 348 | APO17408 | Conjugative transfer protein 345 | - |
| Locus_56 | 53477..53989 | + | 513 | APO17409 | Conjugative signal peptidase TrhF | - |
| Locus_57 | 54000..55124 | + | 1125 | APO17410 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_58 | 55156..56136 | + | 981 | APO17411 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_59 | 56139..59831 | + | 3693 | APO17412 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_60 | 60290..61708 | + | 1419 | APO17413 | hypothetical protein | - |
| Locus_61 | 61705..63744 | + | 2040 | APO17414 | Bipolar DNA helicase HerA | virb4 |
| Locus_62 | 64153..64866 | - | 714 | APO17415 | Endonuclease I precursor | - |
| Locus_63 | 64869..65321 | - | 453 | APO17416 | Il-IS_2, transposase | - |
| Locus_64 | 66063..66575 | - | 513 | APO17417 | Lipoprotein signal peptidase | - |
| Locus_65 | 66579..67334 | - | 756 | APO17418 | Cobalt-zinc-cadmium resistance protein CzcD | - |
| Locus_66 | 67571..67978 | + | 408 | APO17419 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| Locus_67 | 68121..68243 | + | 123 | APO17420 | hypothetical protein | - |
| Locus_68 | 68255..68476 | - | 222 | APO17421 | hypothetical protein | - |