T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40972..64750
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_32 | 36951..37805 | + | 855 | APO17300 | Mrr restriction system protein | - |
| Locus_33 | 37899..38180 | + | 282 | APO17301 | hypothetical protein | - |
| Locus_34 | 38180..38653 | + | 474 | APO17302 | hypothetical protein | - |
| Locus_35 | 38773..40923 | + | 2151 | APO17303 | Conjugative transfer protein TraI, relaxase | - |
| Locus_36 | 40972..42792 | + | 1821 | APO17304 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_37 | 42802..43362 | + | 561 | APO17305 | Conjugative transfer protein 234 | - |
| Locus_38 | 43349..43984 | + | 636 | APO17306 | Conjugative transfer protein s043 | tfc7 |
| Locus_39 | 44011..44598 | - | 588 | APO17307 | hypothetical protein | - |
| Locus_40 | 44887..45168 | + | 282 | APO17308 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_41 | 45165..45791 | + | 627 | APO17309 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_42 | 45775..46671 | + | 897 | APO17310 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_43 | 46674..47963 | + | 1290 | APO17311 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_44 | 47960..48610 | + | 651 | APO17312 | Conjugative transfer protein TraV | traV |
| Locus_45 | 48607..48993 | + | 387 | APO17313 | Conjugative transfer protein TraA | - |
| Locus_46 | 49172..50005 | + | 834 | APO17314 | Ynd | - |
| Locus_47 | 49998..50936 | + | 939 | APO17315 | Ync | - |
| Locus_48 | 51068..51760 | + | 693 | APO17316 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_49 | 51760..54159 | + | 2400 | APO17317 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_50 | 54152..54499 | + | 348 | APO17318 | Conjugative transfer protein 345 | - |
| Locus_51 | 54483..54995 | + | 513 | APO17319 | Conjugative signal peptidase TrhF | - |
| Locus_52 | 55006..56130 | + | 1125 | APO17320 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_53 | 56162..57142 | + | 981 | APO17321 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_54 | 57145..60837 | + | 3693 | APO17322 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_55 | 61296..62714 | + | 1419 | APO17323 | hypothetical protein | - |
| Locus_56 | 62711..64750 | + | 2040 | APO17324 | Bipolar DNA helicase HerA | virb4 |
| Locus_57 | 64996..65109 | + | 114 | APO17325 | hypothetical protein | - |
| Locus_58 | 65159..65872 | - | 714 | APO17326 | Endonuclease I precursor | - |
| Locus_59 | 65875..66327 | - | 453 | APO17327 | Il-IS_2, transposase | - |
| Locus_60 | 66598..67200 | - | 603 | APO17328 | hypothetical protein | - |
| Locus_61 | 67567..67893 | + | 327 | APO17329 | hypothetical protein | - |
| Locus_62 | 67909..68328 | + | 420 | APO17330 | Single-stranded DNA-binding protein | - |
| Locus_63 | 68408..69226 | + | 819 | APO17331 | Recombination protein BET | - |
| Locus_64 | 69309..69452 | + | 144 | APO17332 | hypothetical protein | - |