T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41003..64824
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_34 | 36982..37836 | + | 855 | APO17129 | Mrr restriction system protein | - |
| Locus_35 | 37930..38211 | + | 282 | APO17130 | hypothetical protein | - |
| Locus_36 | 38211..38684 | + | 474 | APO17131 | hypothetical protein | - |
| Locus_37 | 38804..40954 | + | 2151 | APO17132 | Conjugative transfer protein TraI, relaxase | - |
| Locus_38 | 41003..42823 | + | 1821 | APO17133 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_39 | 42833..43393 | + | 561 | APO17134 | Conjugative transfer protein 234 | - |
| Locus_40 | 43380..44015 | + | 636 | APO17135 | Conjugative transfer protein s043 | tfc7 |
| Locus_41 | 44042..44629 | - | 588 | APO17136 | hypothetical protein | - |
| Locus_42 | 44918..45199 | + | 282 | APO17137 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_43 | 45196..45822 | + | 627 | APO17138 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_44 | 45806..46702 | + | 897 | APO17139 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_45 | 46705..47994 | + | 1290 | APO17140 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_46 | 48069..48641 | + | 573 | APO17141 | Conjugative transfer protein TraV | traV |
| Locus_47 | 48638..49024 | + | 387 | APO17142 | Conjugative transfer protein TraA | - |
| Locus_48 | 49203..50036 | + | 834 | APO17143 | Ynd | - |
| Locus_49 | 50029..50967 | + | 939 | APO17144 | Ync | - |
| Locus_50 | 51099..51791 | + | 693 | APO17145 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_51 | 52086..54233 | + | 2148 | APO17146 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_52 | 54226..54573 | + | 348 | APO17147 | Conjugative transfer protein 345 | - |
| Locus_53 | 54557..55069 | + | 513 | APO17148 | Conjugative signal peptidase TrhF | - |
| Locus_54 | 55080..56204 | + | 1125 | APO17149 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_55 | 56236..57216 | + | 981 | APO17150 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_56 | 57219..60911 | + | 3693 | APO17151 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_57 | 61370..62788 | + | 1419 | APO17152 | hypothetical protein | - |
| Locus_58 | 62785..64824 | + | 2040 | APO17153 | Bipolar DNA helicase HerA | virb4 |
| Locus_59 | 65070..65183 | + | 114 | APO17154 | hypothetical protein | - |
| Locus_60 | 65233..65946 | - | 714 | APO17155 | Endonuclease I precursor | - |
| Locus_61 | 65949..66401 | - | 453 | APO17156 | Il-IS_2, transposase | - |
| Locus_62 | 66672..67274 | - | 603 | APO17157 | hypothetical protein | - |
| Locus_63 | 67641..67967 | + | 327 | APO17158 | hypothetical protein | - |
| Locus_64 | 67983..68402 | + | 420 | APO17159 | Single-stranded DNA-binding protein | - |
| Locus_65 | 68482..69300 | + | 819 | APO17160 | Recombination protein BET | - |
| Locus_66 | 69383..69526 | + | 144 | APO17161 | hypothetical protein | - |