T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40516..65337
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_32 | 36979..38160 | + | 1182 | APO17821 | putative inner membrane protein | - |
| Locus_33 | 38317..40467 | + | 2151 | APO17822 | Conjugative transfer protein TraI, relaxase | - |
| Locus_34 | 40516..42336 | + | 1821 | APO17823 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_35 | 42346..42906 | + | 561 | APO17824 | Conjugative transfer protein 234 | - |
| Locus_36 | 42893..43528 | + | 636 | APO17825 | Conjugative transfer protein s043 | tfc7 |
| Locus_37 | 43600..44238 | + | 639 | APO17826 | hypothetical protein | - |
| Locus_38 | 44231..45337 | + | 1107 | APO17827 | Transcriptional regulator | - |
| Locus_39 | 45474..45755 | + | 282 | APO17828 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_40 | 45752..46378 | + | 627 | APO17829 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_41 | 46362..47258 | + | 897 | APO17830 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_42 | 47261..48550 | + | 1290 | APO17831 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_43 | 48625..49197 | + | 573 | APO17832 | Conjugative transfer protein TraV | traV |
| Locus_44 | 49194..49580 | + | 387 | APO17833 | Conjugative transfer protein TraA | - |
| Locus_45 | 49759..50592 | + | 834 | APO17834 | Ynd | - |
| Locus_46 | 50585..51523 | + | 939 | APO17835 | Ync | - |
| Locus_47 | 51655..52347 | + | 693 | APO17836 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_48 | 52347..54746 | + | 2400 | APO17837 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_49 | 54739..55086 | + | 348 | APO17838 | Conjugative transfer protein 345 | - |
| Locus_50 | 55070..55582 | + | 513 | APO17839 | Conjugative signal peptidase TrhF | - |
| Locus_51 | 55590..56717 | + | 1128 | APO17840 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_52 | 56749..57729 | + | 981 | APO17841 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_53 | 57732..61424 | + | 3693 | APO17842 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_54 | 61883..63301 | + | 1419 | APO17843 | hypothetical protein | - |
| Locus_55 | 63298..65337 | + | 2040 | APO17844 | Bipolar DNA helicase HerA | virb4 |
| Locus_56 | 65583..65696 | + | 114 | APO17845 | hypothetical protein | - |
| Locus_57 | 65746..66459 | - | 714 | APO17846 | Endonuclease I precursor | - |
| Locus_58 | 66462..66914 | - | 453 | APO17847 | Il-IS_2, transposase | - |
| Locus_59 | 67175..67777 | - | 603 | APO17848 | hypothetical protein | - |
| Locus_60 | 68144..68470 | + | 327 | APO17849 | hypothetical protein | - |
| Locus_61 | 68486..68905 | + | 420 | APO17850 | Single-stranded DNA-binding protein | - |
| Locus_62 | 68985..69803 | + | 819 | APO17851 | Recombination protein BET | - |
| Locus_63 | 69886..70029 | + | 144 | APO17852 | hypothetical protein | - |