T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33403..61739
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_25 | 33403..34638 | + | 1236 | APO17033 | Bipolar DNA helicase HerA | virb4 |
| Locus_26 | 34802..36952 | + | 2151 | APO17034 | Conjugative transfer protein TraI, relaxase | - |
| Locus_27 | 37078..38181 | - | 1104 | APO17035 | putative virulence protein | - |
| Locus_28 | 38315..40150 | + | 1836 | APO17036 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_29 | 40160..40720 | + | 561 | APO17037 | Conjugative transfer protein 234 | - |
| Locus_30 | 40707..41342 | + | 636 | APO17038 | Conjugative transfer protein s043 | tfc7 |
| Locus_31 | 41316..41435 | - | 120 | APO17039 | hypothetical protein | - |
| Locus_32 | 41481..42587 | + | 1107 | APO17040 | Fic family protein | - |
| Locus_33 | 42777..43058 | + | 282 | APO17041 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_34 | 43055..43681 | + | 627 | APO17042 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_35 | 43665..44561 | + | 897 | APO17043 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_36 | 44564..45853 | + | 1290 | APO17044 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_37 | 45928..46500 | + | 573 | APO17045 | Conjugative transfer protein TraV | traV |
| Locus_38 | 46497..46883 | + | 387 | APO17046 | Conjugative transfer protein TraA | - |
| Locus_39 | 46924..47430 | - | 507 | APO17047 | Acetyltransferase | - |
| Locus_40 | 47421..47687 | - | 267 | APO17048 | hypothetical protein | - |
| Locus_41 | 48056..48748 | + | 693 | APO17049 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_42 | 48749..51148 | + | 2400 | APO17050 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_43 | 51141..51488 | + | 348 | APO17051 | Conjugative transfer protein 345 | - |
| Locus_44 | 51472..51984 | + | 513 | APO17052 | Conjugative signal peptidase TrhF | - |
| Locus_45 | 51995..53119 | + | 1125 | APO17053 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_46 | 53103..54131 | + | 1029 | APO17054 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_47 | 54134..57826 | + | 3693 | APO17055 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_48 | 58285..59703 | + | 1419 | APO17056 | hypothetical protein | - |
| Locus_49 | 59700..61739 | + | 2040 | APO17057 | Bipolar DNA helicase HerA | virb4 |
| Locus_50 | 62148..62498 | - | 351 | APO17058 | Endonuclease I precursor | - |
| Locus_51 | 63846..64109 | - | 264 | APO17059 | Il-IS_2, transposase | - |
| Locus_52 | 64131..64643 | - | 513 | APO17060 | Lipoprotein signal peptidase | - |
| Locus_53 | 64647..65543 | - | 897 | APO17061 | Cobalt-zinc-cadmium resistance protein CzcD | - |
| Locus_54 | 65639..66046 | + | 408 | APO17062 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |