T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23294..42445
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_17 | 20131..21000 | + | 870 | APO17568 | Mrr restriction endonuclease | - |
| Locus_18 | 21095..23245 | + | 2151 | APO17569 | Conjugative transfer protein TraI, relaxase | - |
| Locus_19 | 23294..25114 | + | 1821 | APO17570 | IncF plasmid conjugative transfer protein TraD | virb4 |
| Locus_20 | 25124..25684 | + | 561 | APO17571 | Conjugative transfer protein 234 | - |
| Locus_21 | 25671..26306 | + | 636 | APO17572 | Conjugative transfer protein s043 | tfc7 |
| Locus_22 | 26333..26920 | - | 588 | APO17573 | hypothetical protein | - |
| Locus_23 | 27209..27490 | + | 282 | APO17574 | IncF plasmid conjugative transfer pilus assembly protein TraL | traL |
| Locus_24 | 27487..28113 | + | 627 | APO17575 | IncF plasmid conjugative transfer pilus assembly protein TraE | traE |
| Locus_25 | 28097..28993 | + | 897 | APO17576 | IncF plasmid conjugative transfer pilus assembly protein TraK | traK |
| Locus_26 | 28996..30285 | + | 1290 | APO17577 | IncF plasmid conjugative transfer pilus assembly protein TraB | traB |
| Locus_27 | 30360..30932 | + | 573 | APO17578 | Conjugative transfer protein TraV | traV |
| Locus_28 | 30929..31315 | + | 387 | APO17579 | Conjugative transfer protein TraA | - |
| Locus_29 | 31396..32334 | - | 939 | APO17580 | TIORF34 protein | - |
| Locus_30 | 32676..33368 | + | 693 | APO17581 | Thiol:disulfide involved in conjugative transfer | trbB |
| Locus_31 | 33368..35767 | + | 2400 | APO17582 | IncF plasmid conjugative transfer pilus assembly protein TraC | virb4 |
| Locus_32 | 35760..36107 | + | 348 | APO17583 | Conjugative transfer protein 345 | - |
| Locus_33 | 36091..36603 | + | 513 | APO17584 | Conjugative signal peptidase TrhF | - |
| Locus_34 | 36614..37738 | + | 1125 | APO17585 | IncF plasmid conjugative transfer pilus assembly protein TraW | traW |
| Locus_35 | 37770..38750 | + | 981 | APO17586 | IncF plasmid conjugative transfer pilus assembly protein TraU | traU |
| Locus_36 | 38753..42445 | + | 3693 | APO17587 | IncF plasmid conjugative transfer protein TraN | traN |
| Locus_37 | 42755..43645 | + | 891 | APO17588 | putative integrase | - |
| Locus_38 | 43642..44694 | + | 1053 | APO17589 | transposase | - |