T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40821..65642
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_28 | 37284..38465 | + | 1182 | ALP69257 | hypothetical protein | - |
| Locus_29 | 38622..40772 | + | 2151 | ALP69260 | TraI | - |
| Locus_30 | 40821..42641 | + | 1821 | ALP69261 | TraD | virb4 |
| Locus_31 | 42651..43211 | + | 561 | ALP69262 | hypothetical protein | - |
| Locus_32 | 43198..43833 | + | 636 | ALP69263 | Conjugative transfer protein s043 | tfc7 |
| Locus_33 | 43905..44531 | + | 627 | ALP69258 | hypothetical protein | - |
| Locus_34 | 44743..45642 | + | 900 | ALP69259 | putative Zn peptidase | - |
| Locus_35 | 45779..46060 | + | 282 | ALP69264 | TraL | traL |
| Locus_36 | 46291..46683 | + | 393 | ALP69265 | TraE | traE |
| Locus_37 | 46664..47563 | + | 900 | ALP69266 | TraK | traK |
| Locus_38 | 47566..48855 | + | 1290 | ALP69267 | TraB | traB |
| Locus_39 | 48852..49502 | + | 651 | ALP69268 | HtdD | traV |
| Locus_40 | 49499..49885 | + | 387 | ALP69269 | TraA | - |
| Locus_41 | 50064..50897 | + | 834 | ALP69270 | Ynd | - |
| Locus_42 | 50890..51828 | + | 939 | ALP69271 | Ync | - |
| Locus_43 | 51960..52652 | + | 693 | ALP69272 | thiol:disulfide interchange protein DsbC | trbB |
| Locus_44 | 52652..55051 | + | 2400 | ALP69273 | TraC | virb4 |
| Locus_45 | 55375..55887 | + | 513 | ALP69274 | TrbI | - |
| Locus_46 | 55898..57022 | + | 1125 | ALP69275 | TraW | traW |
| Locus_47 | 57006..58034 | + | 1029 | ALP69276 | TraU | traU |
| Locus_48 | 58037..61729 | + | 3693 | ALP69277 | TraN | traN |
| Locus_49 | 62188..63606 | + | 1419 | ALP69278 | hypothetical protein | - |
| Locus_50 | 63603..65642 | + | 2040 | ALP69279 | hypothetical protein | virb4 |
| Locus_51 | 66767..67981 | - | 1215 | ALP69280 | putative transposase TnpA | - |
| Locus_52 | 68078..68590 | - | 513 | ALP69281 | putative lipoprotein signal peptidase LspA | - |
| Locus_53 | 68594..69490 | - | 897 | ALP69282 | putative cation-efflux family protein | - |
| Locus_54 | 69586..69993 | + | 408 | ALP69283 | putative MerR family regulator | - |