T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8648..18312
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D3Y55_RS31670 (D3Y55_31680) | 4600..5595 | - | 996 | WP_119921774 | plasmid partitioning protein RepB | - |
| D3Y55_RS31675 (D3Y55_31685) | 5680..6870 | - | 1191 | WP_119921775 | plasmid partitioning protein RepA | - |
| D3Y55_RS31680 (D3Y55_31690) | 7247..7633 | + | 387 | WP_119921776 | hypothetical protein | - |
| D3Y55_RS31685 (D3Y55_31695) | 7650..8012 | - | 363 | WP_119921777 | transcriptional regulator | - |
| D3Y55_RS31690 (D3Y55_31700) | 8106..8645 | + | 540 | WP_119921778 | hypothetical protein | - |
| D3Y55_RS31695 (D3Y55_31705) | 8648..9334 | + | 687 | WP_119921779 | lytic transglycosylase domain-containing protein | virB1 |
| D3Y55_RS31700 (D3Y55_31710) | 9331..9630 | + | 300 | WP_119921780 | TrbC/VirB2 family protein | virB2 |
| D3Y55_RS31705 (D3Y55_31715) | 9633..9974 | + | 342 | WP_119921781 | type IV secretion system protein VirB3 | virB3 |
| D3Y55_RS31710 (D3Y55_31720) | 9967..12348 | + | 2382 | WP_119921782 | VirB4 family type IV secretion system protein | virb4 |
| D3Y55_RS31715 (D3Y55_31725) | 12348..13046 | + | 699 | WP_119921783 | P-type DNA transfer protein VirB5 | virB5 |
| D3Y55_RS31720 (D3Y55_31730) | 13043..13276 | + | 234 | WP_119921784 | EexN family lipoprotein | - |
| D3Y55_RS31725 (D3Y55_31735) | 13281..14216 | + | 936 | WP_119921785 | type IV secretion system protein | virB6 |
| D3Y55_RS33280 (D3Y55_31740) | 14254..14520 | + | 267 | WP_119921786 | hypothetical protein | - |
| D3Y55_RS31735 (D3Y55_31745) | 14524..15195 | + | 672 | WP_119921787 | virB8 family protein | virB8 |
| D3Y55_RS31740 (D3Y55_31750) | 15192..16046 | + | 855 | WP_165867741 | P-type conjugative transfer protein VirB9 | virB9 |
| D3Y55_RS31745 (D3Y55_31755) | 16061..17233 | + | 1173 | WP_119921788 | type IV secretion system protein VirB10 | virB10 |
| D3Y55_RS31750 (D3Y55_31760) | 17242..18312 | + | 1071 | WP_119921789 | P-type DNA transfer ATPase VirB11 | virB11 |
| D3Y55_RS31755 (D3Y55_31765) | 18811..19011 | + | 201 | WP_119921790 | site-specific integrase | - |
| D3Y55_RS31760 (D3Y55_31770) | 19035..19307 | + | 273 | WP_119921791 | transposase | - |
| D3Y55_RS33675 (D3Y55_31775) | 19320..19445 | + | 126 | Protein_23 | integrase | - |
| D3Y55_RS31770 (D3Y55_31780) | 19496..20224 | - | 729 | WP_119921792 | amino acid ABC transporter ATP-binding protein | - |
| D3Y55_RS31775 (D3Y55_31785) | 20249..20941 | - | 693 | WP_119921793 | ABC transporter permease subunit | - |
| D3Y55_RS31780 (D3Y55_31790) | 20968..21687 | - | 720 | WP_119921794 | amino acid ABC transporter permease | - |
| D3Y55_RS31785 (D3Y55_31795) | 21735..22655 | - | 921 | WP_245443980 | amino acid ABC transporter substrate-binding protein | - |