T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 15882..27103
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FF957_RS14895 (FF957_14895) | 11156..11632 | + | 477 | WP_000664727 | replication/maintenance protein RepL | - |
| FF957_RS14900 (FF957_14900) | 12340..13074 | + | 735 | WP_001003260 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C) | - |
| FF957_RS14905 (FF957_14905) | 13371..14045 | + | 675 | WP_001106019 | IS6-like element IS257 family transposase | - |
| FF957_RS14910 (FF957_14910) | 14154..14342 | - | 189 | WP_001063224 | hypothetical protein | - |
| FF957_RS14915 (FF957_14915) | 14514..15488 | + | 975 | WP_000368849 | conjugative transfer protein TrsA | - |
| FF957_RS14920 (FF957_14920) | 15505..15822 | + | 318 | WP_000591622 | CagC family type IV secretion system protein | - |
| FF957_RS14925 (FF957_14925) | 15882..16289 | + | 408 | WP_000110157 | hypothetical protein | trsC |
| FF957_RS14930 (FF957_14930) | 16276..16959 | + | 684 | WP_000979860 | TrsD/TraD family conjugative transfer protein | trsD |
| FF957_RS14935 (FF957_14935) | 16980..18992 | + | 2013 | WP_000874919 | VirB4 family type IV secretion system protein | virb4 |
| FF957_RS14940 (FF957_14940) | 19004..20284 | + | 1281 | WP_000702361 | membrane protein | trsF |
| FF957_RS14945 (FF957_14945) | 20302..21378 | + | 1077 | WP_000269385 | CHAP domain-containing protein | trsG |
| FF957_RS14950 (FF957_14950) | 21388..21873 | + | 486 | WP_000735569 | TrsH/TraH family protein | - |
| FF957_RS14955 (FF957_14955) | 21889..23991 | + | 2103 | WP_001094109 | DNA topoisomerase III | - |
| FF957_RS14960 (FF957_14960) | 24007..24471 | + | 465 | WP_000715273 | hypothetical protein | trsJ |
| FF957_RS14965 (FF957_14965) | 24468..26108 | + | 1641 | WP_000209436 | VirD4-like conjugal transfer protein, CD1115 family | - |
| FF957_RS14970 (FF957_14970) | 26186..27103 | + | 918 | WP_000383804 | conjugal transfer protein TrbL family protein | trsL |
| FF957_RS14975 (FF957_14975) | 27120..27512 | + | 393 | WP_000608970 | single-stranded DNA-binding protein | - |
| FF957_RS15305 | 27569..27736 | + | 168 | WP_000869301 | hypothetical protein | - |
| FF957_RS14980 (FF957_14980) | 27774..28448 | + | 675 | WP_001105950 | IS6-like element IS257 family transposase | - |
| FF957_RS14985 (FF957_14985) | 28578..29192 | + | 615 | WP_000527296 | hypothetical protein | - |
| FF957_RS14990 (FF957_14990) | 29261..30532 | + | 1272 | WP_000386736 | hypothetical protein | - |
| FF957_RS14995 (FF957_14995) | 30574..30990 | - | 417 | WP_000691761 | YolD-like family protein | - |
| FF957_RS15000 (FF957_15000) | 31285..31842 | + | 558 | WP_001273859 | recombinase family protein | - |