T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 29949..55074
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PF038_RS20645 (PF038_20625) | 25045..25368 | + | 324 | WP_008324183 | hypothetical protein | - |
| PF038_RS20650 (PF038_20630) | 25430..25696 | + | 267 | WP_022652251 | hypothetical protein | - |
| PF038_RS20655 (PF038_20635) | 26417..26791 | + | 375 | WP_008324180 | hypothetical protein | - |
| PF038_RS20660 (PF038_20640) | 26845..27132 | + | 288 | WP_008324178 | hypothetical protein | - |
| PF038_RS20665 (PF038_20645) | 27179..27523 | + | 345 | WP_022652252 | hypothetical protein | - |
| PF038_RS20670 (PF038_20650) | 27609..27872 | + | 264 | WP_008324174 | hypothetical protein | - |
| PF038_RS20675 (PF038_20655) | 27915..28745 | + | 831 | WP_022652253 | N-6 DNA methylase | - |
| PF038_RS20680 (PF038_20660) | 29372..29902 | + | 531 | WP_008324170 | antirestriction protein | - |
| PF038_RS20685 (PF038_20665) | 29949..30425 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| PF038_RS20690 (PF038_20670) | 30857..31249 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PF038_RS20695 (PF038_20675) | 31438..32127 | + | 690 | WP_008324166 | hypothetical protein | - |
| PF038_RS20700 (PF038_20680) | 32214..32438 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| PF038_RS20705 (PF038_20685) | 32496..32846 | + | 351 | WP_008324162 | type IV conjugative transfer system pilin TraA | - |
| PF038_RS20710 (PF038_20690) | 32997..33302 | + | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| PF038_RS20715 (PF038_20695) | 33317..33883 | + | 567 | WP_008324158 | type IV conjugative transfer system protein TraE | traE |
| PF038_RS20720 (PF038_20700) | 33870..34613 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| PF038_RS20725 (PF038_20705) | 34600..35994 | + | 1395 | WP_008324156 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PF038_RS20730 (PF038_20710) | 36016..36555 | + | 540 | WP_008324154 | type IV conjugative transfer system lipoprotein TraV | traV |
| PF038_RS20735 (PF038_20715) | 36675..36899 | + | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| PF038_RS20740 (PF038_20720) | 36903..37088 | + | 186 | WP_022652254 | hypothetical protein | - |
| PF038_RS20745 (PF038_20725) | 37072..37473 | + | 402 | WP_008324137 | hypothetical protein | - |
| PF038_RS20750 (PF038_20730) | 37463..38029 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| PF038_RS20755 (PF038_20735) | 38022..40652 | + | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| PF038_RS20760 (PF038_20740) | 40649..40996 | + | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| PF038_RS20765 (PF038_20745) | 40996..41643 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| PF038_RS20770 (PF038_20750) | 41646..42632 | + | 987 | WP_032160671 | conjugal transfer pilus assembly protein TraU | traU |
| PF038_RS20775 (PF038_20755) | 42649..43278 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PF038_RS20780 (PF038_20760) | 43275..45128 | + | 1854 | WP_022652255 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PF038_RS20785 (PF038_20765) | 45160..45348 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| PF038_RS20790 (PF038_20770) | 45379..46128 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PF038_RS20795 (PF038_20775) | 46145..46393 | + | 249 | WP_008324126 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PF038_RS20800 (PF038_20780) | 46383..46937 | + | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PF038_RS20805 (PF038_20785) | 46930..47358 | + | 429 | WP_008324122 | hypothetical protein | - |
| PF038_RS20810 (PF038_20790) | 47345..48715 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| PF038_RS20815 (PF038_20795) | 48715..51537 | + | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| PF038_RS20820 (PF038_20800) | 51559..51990 | + | 432 | WP_008324118 | entry exclusion protein | - |
| PF038_RS20825 (PF038_20805) | 52065..52739 | + | 675 | WP_008324909 | tetratricopeptide repeat protein | - |
| PF038_RS20830 (PF038_20810) | 52873..55074 | + | 2202 | WP_023307203 | type IV conjugative transfer system coupling protein TraD | virb4 |