T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1552..14195
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRK84_RS26775 (NRK84_26775) | 1..606 | - | 606 | Protein_0 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NRK84_RS26780 (NRK84_26780) | 633..1154 | - | 522 | WP_015059014 | hypothetical protein | - |
| NRK84_RS26785 (NRK84_26785) | 1217..1525 | - | 309 | WP_000412447 | hypothetical protein | - |
| NRK84_RS26790 (NRK84_26790) | 1552..2544 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| NRK84_RS26795 (NRK84_26795) | 2541..3173 | - | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| NRK84_RS26800 (NRK84_26800) | 3170..3556 | - | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| NRK84_RS26805 (NRK84_26805) | 3553..6180 | - | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| NRK84_RS26810 (NRK84_26810) | 6340..6561 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| NRK84_RS26815 (NRK84_26815) | 6696..7211 | - | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| NRK84_RS26820 (NRK84_26820) | 7208..7459 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| NRK84_RS26825 (NRK84_26825) | 7471..7668 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| NRK84_RS26830 (NRK84_26830) | 7655..8245 | - | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| NRK84_RS26835 (NRK84_26835) | 8235..9662 | - | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NRK84_RS26840 (NRK84_26840) | 9662..10390 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| NRK84_RS26845 (NRK84_26845) | 10377..10943 | - | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| NRK84_RS26850 (NRK84_26850) | 10965..11276 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| NRK84_RS26855 (NRK84_26855) | 11291..11656 | - | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| NRK84_RS26860 (NRK84_26860) | 11690..11917 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| NRK84_RS26865 (NRK84_26865) | 12011..12697 | - | 687 | WP_015059009 | PAS domain-containing protein | - |
| NRK84_RS26870 (NRK84_26870) | 12888..13271 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NRK84_RS26875 (NRK84_26875) | 13548..14195 | + | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| NRK84_RS26880 (NRK84_26880) | 14492..15313 | - | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| NRK84_RS26885 (NRK84_26885) | 15424..15720 | - | 297 | WP_001272251 | hypothetical protein | - |
| NRK84_RS26890 (NRK84_26890) | 16020..16316 | + | 297 | Protein_23 | hypothetical protein | - |
| NRK84_RS26895 (NRK84_26895) | 16635..16760 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| NRK84_RS26900 (NRK84_26900) | 16702..16851 | - | 150 | Protein_25 | plasmid maintenance protein Mok | - |
| NRK84_RS26905 (NRK84_26905) | 17073..17792 | - | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| NRK84_RS26910 (NRK84_26910) | 17789..18223 | - | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |