T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33690..55623
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NVV52_RS28790 (NVV52_28790) | 28837..29331 | - | 495 | WP_032440571 | molybdopterin-dependent oxidoreductase | - |
| NVV52_RS28795 (NVV52_28795) | 29324..30253 | - | 930 | WP_032440581 | hypothetical protein | - |
| NVV52_RS28800 (NVV52_28800) | 30313..31155 | - | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| NVV52_RS28805 (NVV52_28805) | 31765..31992 | + | 228 | WP_032440573 | hypothetical protein | - |
| NVV52_RS28810 (NVV52_28810) | 32724..33203 | + | 480 | WP_032440574 | lytic transglycosylase domain-containing protein | - |
| NVV52_RS28815 (NVV52_28815) | 33229..33693 | + | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| NVV52_RS28820 (NVV52_28820) | 33690..34508 | + | 819 | WP_032440576 | type IV secretory system conjugative DNA transfer family protein | traI |
| NVV52_RS28825 (NVV52_28825) | 34486..35673 | + | 1188 | WP_077255878 | plasmid transfer ATPase TraJ | - |
| NVV52_RS28830 (NVV52_28830) | 35670..35936 | + | 267 | WP_032440577 | IcmT/TraK family protein | traK |
| NVV52_RS28835 (NVV52_28835) | 35954..39367 | + | 3414 | WP_052145516 | LPD7 domain-containing protein | - |
| NVV52_RS28840 (NVV52_28840) | 39401..39754 | + | 354 | WP_032440584 | hypothetical protein | traL |
| NVV52_RS28845 (NVV52_28845) | 39826..40494 | + | 669 | WP_032440585 | DotI/IcmL/TraM family protein | traM |
| NVV52_RS28850 (NVV52_28850) | 40505..41608 | + | 1104 | WP_077264204 | DotH/IcmK family type IV secretion protein | traN |
| NVV52_RS28855 (NVV52_28855) | 41612..42952 | + | 1341 | WP_032440586 | conjugal transfer protein TraO | traO |
| NVV52_RS28860 (NVV52_28860) | 42959..43678 | + | 720 | WP_050597333 | conjugal transfer protein TraP | traP |
| NVV52_RS28865 (NVV52_28865) | 43688..44221 | + | 534 | WP_032440587 | conjugal transfer protein TraQ | traQ |
| NVV52_RS28870 (NVV52_28870) | 44277..44678 | + | 402 | WP_032440588 | DUF6750 family protein | traR |
| NVV52_RS28875 (NVV52_28875) | 44722..45285 | + | 564 | WP_045325070 | hypothetical protein | traT |
| NVV52_RS28880 (NVV52_28880) | 45295..48342 | + | 3048 | WP_032440589 | conjugal transfer protein | traU |
| NVV52_RS28885 (NVV52_28885) | 48352..49548 | + | 1197 | WP_032440590 | conjugal transfer protein TraW | traW |
| NVV52_RS28890 (NVV52_28890) | 49545..50126 | + | 582 | WP_050597335 | conjugal transfer protein TraX | - |
| NVV52_RS28895 (NVV52_28895) | 50168..52312 | + | 2145 | WP_032440591 | DotA/TraY family protein | traY |
| NVV52_RS28900 (NVV52_28900) | 52378..53001 | + | 624 | WP_032440592 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NVV52_RS28905 (NVV52_28905) | 53103..54521 | + | 1419 | WP_063666705 | hypothetical protein | trbA |
| NVV52_RS28910 (NVV52_28910) | 54532..55623 | + | 1092 | WP_050597336 | thioredoxin fold domain-containing protein | trbB |
| NVV52_RS28915 (NVV52_28915) | 55625..57817 | + | 2193 | WP_032440593 | F-type conjugative transfer protein TrbC | - |
| NVV52_RS28920 (NVV52_28920) | 57863..58396 | + | 534 | WP_032440594 | phospholipase D family protein | - |
| NVV52_RS28925 (NVV52_28925) | 58408..58659 | + | 252 | WP_113394424 | hypothetical protein | - |
| NVV52_RS28930 (NVV52_28930) | 59165..59860 | + | 696 | WP_254910806 | RepA family replication protein | - |