T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 19184..32102
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPU83_RS33475 (LPU83_pLPU83b_0322) | 14198..15412 | - | 1215 | WP_024317469 | plasmid replication protein RepC | - |
| LPU83_RS33575 (LPU83_pLPU83b_0323) | 15604..16641 | - | 1038 | WP_024317470 | plasmid partitioning protein RepB | - |
| LPU83_RS33580 (LPU83_pLPU83b_0324) | 16638..17861 | - | 1224 | WP_024317471 | plasmid partitioning protein RepA | - |
| LPU83_RS33595 (LPU83_pLPU83b_0325) | 18550..19173 | + | 624 | WP_024317472 | acyl-homoserine-lactone synthase TraI | - |
| LPU83_RS33600 (LPU83_pLPU83b_0326) | 19184..20161 | + | 978 | WP_024317473 | P-type conjugative transfer ATPase TrbB | virB11 |
| LPU83_RS34040 (LPU83_pLPU83b_0327) | 20151..20534 | + | 384 | WP_024317474 | TrbC/VirB2 family protein | virB2 |
| LPU83_RS34125 (LPU83_pLPU83b_0328) | 20527..20826 | + | 300 | WP_024317475 | conjugal transfer protein TrbD | virB3 |
| LPU83_RS34375 (LPU83_pLPU83b_0329) | 20837..23293 | + | 2457 | WP_024317476 | conjugal transfer protein TrbE | virb4 |
| LPU83_RS34395 (LPU83_pLPU83b_0330) | 23265..24068 | + | 804 | WP_024317477 | P-type conjugative transfer protein TrbJ | virB5 |
| LPU83_RS34420 (LPU83_pLPU83b_0331) | 24065..24262 | + | 198 | WP_024317478 | entry exclusion protein TrbK | - |
| LPU83_RS34440 (LPU83_pLPU83b_0332) | 24256..25437 | + | 1182 | WP_024317479 | P-type conjugative transfer protein TrbL | virB6 |
| LPU83_RS34445 (LPU83_pLPU83b_0333) | 25458..26120 | + | 663 | WP_024317480 | conjugal transfer protein TrbF | virB8 |
| LPU83_RS34450 (LPU83_pLPU83b_0334) | 26138..26950 | + | 813 | WP_024317481 | P-type conjugative transfer protein TrbG | virB9 |
| LPU83_RS34460 (LPU83_pLPU83b_0335) | 26954..27394 | + | 441 | WP_024317482 | conjugal transfer protein TrbH | - |
| LPU83_RS34465 (LPU83_pLPU83b_0336) | 27406..28704 | + | 1299 | WP_024317483 | IncP-type conjugal transfer protein TrbI | virB10 |
| LPU83_RS34510 (LPU83_pLPU83b_0337) | 29029..29733 | + | 705 | WP_024317484 | autoinducer binding domain-containing protein | - |
| LPU83_RS34515 (LPU83_pLPU83b_0338) | 29737..30027 | - | 291 | WP_024317485 | transcriptional repressor TraM | - |
| LPU83_RS34540 (LPU83_pLPU83b_0339) | 30318..30557 | + | 240 | WP_024317486 | helix-turn-helix transcriptional regulator | - |
| LPU83_RS73815 (LPU83_pLPU83b_0340) | 30681..31223 | + | 543 | WP_024317487 | hypothetical protein | - |
| LPU83_RS34575 (LPU83_pLPU83b_0341) | 31479..32102 | - | 624 | WP_024317488 | TraH family protein | virB1 |
| LPU83_RS34580 (LPU83_pLPU83b_0342) | 32119..33282 | - | 1164 | WP_024317489 | conjugal transfer protein TraB | - |
| LPU83_RS34585 (LPU83_pLPU83b_0343) | 33272..33769 | - | 498 | WP_231052413 | conjugative transfer signal peptidase TraF | - |