T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 141515..152946
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN425_RS00865 (SEEN425_00850) | 137546..137779 | - | 234 | WP_001191890 | hypothetical protein | - |
| SEEN425_RS00870 (SEEN425_00855) | 137761..138378 | - | 618 | WP_001249395 | hypothetical protein | - |
| SEEN425_RS00875 (SEEN425_00860) | 138546..141518 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| SEEN425_RS00880 (SEEN425_00865) | 141515..143380 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| SEEN425_RS00885 (SEEN425_00870) | 143430..143975 | + | 546 | WP_000228720 | hypothetical protein | - |
| SEEN425_RS00890 (SEEN425_00875) | 143932..144561 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| SEEN425_RS00895 (SEEN425_00880) | 144571..145017 | + | 447 | WP_000122507 | hypothetical protein | - |
| SEEN425_RS00900 (SEEN425_00885) | 145027..145404 | + | 378 | WP_000869297 | hypothetical protein | - |
| SEEN425_RS00905 (SEEN425_00890) | 145404..146066 | + | 663 | WP_001231464 | hypothetical protein | - |
| SEEN425_RS00910 (SEEN425_00900) | 146402..146767 | + | 366 | WP_001052530 | hypothetical protein | - |
| SEEN425_RS00915 (SEEN425_00905) | 146912..147193 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| SEEN425_RS00920 (SEEN425_00910) | 147190..147816 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| SEEN425_RS00925 (SEEN425_00915) | 147800..148717 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| SEEN425_RS00930 (SEEN425_00920) | 148717..150030 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| SEEN425_RS00935 (SEEN425_00925) | 150027..150605 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEEN425_RS00940 (SEEN425_00930) | 150609..151001 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| SEEN425_RS00945 | 151286..152245 | + | 960 | Protein_182 | IS1380-like element ISEcp1 family transposase | - |
| SEEN425_RS00950 (SEEN425_00940) | 152239..152946 | - | 708 | WP_000637385 | conjugal transfer protein TraC | virb4 |
| SEEN425_RS00955 (SEEN425_00945) | 152943..153650 | - | 708 | WP_001259346 | DsbC family protein | - |
| SEEN425_RS26340 (SEEN425_00950) | 153798..157196 | - | 3399 | WP_235617927 | hypothetical protein | - |