T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 69970..95140
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A225_RS30625 (A225_NDM1p0410) | 69970..72216 | - | 2247 | WP_016479979 | type IV conjugative transfer system coupling protein TraD | virb4 |
| A225_RS34985 | 72350..72679 | - | 330 | WP_223856629 | tetratricopeptide repeat protein | - |
| A225_RS34990 | 72687..73025 | - | 339 | WP_032072912 | tetratricopeptide repeat protein | - |
| A225_RS35070 | 73100..73315 | - | 216 | WP_320077096 | hypothetical protein | - |
| A225_RS35075 | 73261..73530 | - | 270 | WP_320077097 | hypothetical protein | - |
| A225_RS30640 (A225_NDM1p0415) | 73552..76374 | - | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| A225_RS30645 (A225_NDM1p0420) | 76374..77744 | - | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| A225_RS30650 (A225_NDM1p0430) | 77731..78159 | - | 429 | WP_008324122 | hypothetical protein | - |
| A225_RS30655 (A225_NDM1p0435) | 78152..78706 | - | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| A225_RS30660 (A225_NDM1p0440) | 78696..78944 | - | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A225_RS30665 (A225_NDM1p0445) | 78961..79710 | - | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| A225_RS30670 (A225_NDM1p0450) | 79741..79929 | - | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| A225_RS30675 (A225_NDM1p0455) | 79961..81814 | - | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| A225_RS30680 (A225_NDM1p0460) | 81811..82440 | - | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| A225_RS30685 (A225_NDM1p0465) | 82457..83443 | - | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| A225_RS30690 (A225_NDM1p0470) | 83446..84093 | - | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| A225_RS30695 (A225_NDM1p0475) | 84093..84440 | - | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| A225_RS30700 (A225_NDM1p0480) | 84437..87067 | - | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| A225_RS30705 (A225_NDM1p0485) | 87060..87626 | - | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| A225_RS30710 (A225_NDM1p0490) | 87616..88017 | - | 402 | WP_016479985 | hypothetical protein | - |
| A225_RS32875 (A225_NDM1p0495) | 88001..88186 | - | 186 | WP_008324139 | hypothetical protein | - |
| A225_RS30715 | 88190..88414 | - | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| A225_RS30720 (A225_NDM1p0500) | 88534..89073 | - | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| A225_RS30725 (A225_NDM1p0505) | 89095..90489 | - | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| A225_RS30730 (A225_NDM1p0510) | 90476..91219 | - | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| A225_RS30735 (A225_NDM1p0515) | 91206..91772 | - | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| A225_RS30740 (A225_NDM1p0520) | 91787..92092 | - | 306 | WP_016479987 | type IV conjugative transfer system protein TraL | traL |
| A225_RS30745 (A225_NDM1p0525) | 92243..92593 | - | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| A225_RS30750 (A225_NDM1p0530) | 92651..92875 | - | 225 | WP_008324165 | TraY domain-containing protein | - |
| A225_RS30755 | 92962..93651 | - | 690 | WP_008324166 | hypothetical protein | - |
| A225_RS30760 (A225_NDM1p0535) | 93840..94232 | - | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A225_RS30765 (A225_NDM1p0160) | 94664..95140 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| A225_RS30770 (A225_NDM1p0540) | 95187..95717 | - | 531 | WP_008324170 | antirestriction protein | - |
| A225_RS30775 (A225_NDM1p0545) | 96344..97174 | - | 831 | WP_008324171 | N-6 DNA methylase | - |
| A225_RS34995 (A225_NDM1p0550) | 97217..97393 | - | 177 | WP_016479991 | hypothetical protein | - |
| A225_RS30785 (A225_NDM1p0555) | 97565..97909 | - | 345 | WP_008324177 | hypothetical protein | - |
| A225_RS30790 | 97956..98243 | - | 288 | WP_008324178 | hypothetical protein | - |
| A225_RS30795 (A225_NDM1p0560) | 98297..98671 | - | 375 | WP_008324180 | hypothetical protein | - |
| A225_RS30800 (A225_NDM1p0565) | 99298..99657 | - | 360 | WP_015493069 | hypothetical protein | - |
| A225_RS34560 (A225_NDM1p0570) | 99719..100042 | - | 324 | WP_008324183 | hypothetical protein | - |