T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 250329..263382
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RGCCGE502_RS38590 | 245442..245543 | - | 102 | Protein_240 | replication initiation protein RepC | - |
| RGCCGE502_RS33280 (RGCCGE502_33751) | 245599..246813 | - | 1215 | WP_016558628 | plasmid replication protein RepC | - |
| RGCCGE502_RS33285 (RGCCGE502_33756) | 246999..248006 | - | 1008 | WP_016558629 | plasmid partitioning protein RepB | - |
| RGCCGE502_RS33290 (RGCCGE502_33761) | 248104..249336 | - | 1233 | WP_019280633 | plasmid partitioning protein RepA | - |
| RGCCGE502_RS33295 (RGCCGE502_33766) | 249694..250317 | + | 624 | WP_016558631 | acyl-homoserine-lactone synthase TraI | - |
| RGCCGE502_RS33300 (RGCCGE502_33771) | 250329..251306 | + | 978 | WP_016558632 | P-type conjugative transfer ATPase TrbB | virB11 |
| RGCCGE502_RS33305 (RGCCGE502_33776) | 251296..251673 | + | 378 | WP_016558633 | TrbC/VirB2 family protein | virB2 |
| RGCCGE502_RS33310 (RGCCGE502_33781) | 251666..251965 | + | 300 | WP_016558634 | conjugal transfer protein TrbD | virB3 |
| RGCCGE502_RS33315 (RGCCGE502_33786) | 251976..254432 | + | 2457 | WP_016558635 | conjugal transfer protein TrbE | virb4 |
| RGCCGE502_RS33320 (RGCCGE502_33791) | 254404..255207 | + | 804 | WP_016558636 | P-type conjugative transfer protein TrbJ | virB5 |
| RGCCGE502_RS33325 (RGCCGE502_33796) | 255201..256391 | + | 1191 | WP_016558637 | P-type conjugative transfer protein TrbL | virB6 |
| RGCCGE502_RS33330 (RGCCGE502_33801) | 256414..257076 | + | 663 | WP_016558638 | conjugal transfer protein TrbF | virB8 |
| RGCCGE502_RS33335 (RGCCGE502_33806) | 257093..257917 | + | 825 | WP_016558639 | P-type conjugative transfer protein TrbG | virB9 |
| RGCCGE502_RS33340 (RGCCGE502_33811) | 257905..258342 | + | 438 | WP_016558640 | conjugal transfer protein TrbH | - |
| RGCCGE502_RS33345 (RGCCGE502_33816) | 258353..259675 | + | 1323 | WP_016558641 | IncP-type conjugal transfer protein TrbI | virB10 |
| RGCCGE502_RS33350 (RGCCGE502_33821) | 259896..260600 | + | 705 | WP_016558642 | autoinducer binding domain-containing protein | - |
| RGCCGE502_RS33355 (RGCCGE502_33826) | 260604..260924 | - | 321 | WP_016558643 | transcriptional repressor TraM | - |
| RGCCGE502_RS33360 (RGCCGE502_33831) | 261121..261357 | + | 237 | WP_016558644 | helix-turn-helix transcriptional regulator | - |
| RGCCGE502_RS38595 (RGCCGE502_33841) | 261528..261746 | - | 219 | WP_016558646 | hypothetical protein | - |
| RGCCGE502_RS38600 (RGCCGE502_33846) | 261743..262354 | - | 612 | WP_019280635 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| RGCCGE502_RS33370 (RGCCGE502_33856) | 262768..263382 | - | 615 | WP_016558649 | TraH family protein | virB1 |
| RGCCGE502_RS33375 (RGCCGE502_33861) | 263398..264561 | - | 1164 | WP_016558650 | conjugal transfer protein TraB | - |
| RGCCGE502_RS33380 (RGCCGE502_33866) | 264551..265117 | - | 567 | WP_016558651 | conjugative transfer signal peptidase TraF | - |