T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 194133..224147
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCF24_RS01015 (QCF24_01015) | 194133..196445 | - | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |
| QCF24_RS01020 (QCF24_01020) | 196574..197263 | - | 690 | WP_015065540 | hypothetical protein | - |
| QCF24_RS01025 (QCF24_01025) | 197455..198186 | - | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| QCF24_RS01030 (QCF24_01030) | 198495..199019 | - | 525 | WP_015065538 | hypothetical protein | - |
| QCF24_RS01035 (QCF24_01035) | 199030..201873 | - | 2844 | WP_023157999 | conjugal transfer mating-pair stabilization protein TraG | traG |
| QCF24_RS01040 (QCF24_01040) | 201873..203252 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| QCF24_RS01045 (QCF24_01045) | 203230..203673 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| QCF24_RS01050 (QCF24_01050) | 203719..204276 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| QCF24_RS01055 (QCF24_01055) | 204248..204487 | - | 240 | WP_023158003 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QCF24_RS01060 (QCF24_01060) | 204498..205250 | - | 753 | WP_015065535 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| QCF24_RS01065 (QCF24_01065) | 205271..205597 | - | 327 | WP_015065534 | hypothetical protein | - |
| QCF24_RS01070 (QCF24_01070) | 205610..205858 | - | 249 | WP_004152675 | hypothetical protein | - |
| QCF24_RS01075 (QCF24_01075) | 205836..206090 | - | 255 | WP_015065558 | conjugal transfer protein TrbE | - |
| QCF24_RS01080 (QCF24_01080) | 206122..208077 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| QCF24_RS01085 (QCF24_01085) | 208136..208783 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| QCF24_RS01090 (QCF24_01090) | 208862..209038 | - | 177 | WP_162866177 | hypothetical protein | - |
| QCF24_RS01095 (QCF24_01095) | 209059..210048 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| QCF24_RS01100 (QCF24_01100) | 210045..210446 | - | 402 | WP_023158005 | hypothetical protein | - |
| QCF24_RS01105 (QCF24_01105) | 210481..211116 | - | 636 | WP_023158006 | type-F conjugative transfer system protein TraW | traW |
| QCF24_RS01110 (QCF24_01110) | 211116..211505 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| QCF24_RS01115 (QCF24_01115) | 211505..214144 | - | 2640 | WP_023158007 | type IV secretion system protein TraC | virb4 |
| QCF24_RS01120 (QCF24_01120) | 214216..214614 | - | 399 | WP_023158008 | hypothetical protein | - |
| QCF24_RS01125 (QCF24_01125) | 214622..215011 | - | 390 | WP_023158009 | hypothetical protein | - |
| QCF24_RS01130 (QCF24_01130) | 215054..215458 | - | 405 | WP_016831042 | hypothetical protein | - |
| QCF24_RS01135 (QCF24_01135) | 215525..215836 | - | 312 | WP_014386200 | hypothetical protein | - |
| QCF24_RS01140 (QCF24_01140) | 215837..216055 | - | 219 | WP_014386199 | hypothetical protein | - |
| QCF24_RS01145 (QCF24_01145) | 216079..216368 | - | 290 | Protein_231 | hypothetical protein | - |
| QCF24_RS01150 (QCF24_01150) | 216373..216783 | - | 411 | WP_016831039 | hypothetical protein | - |
| QCF24_RS01155 (QCF24_01155) | 216915..217499 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| QCF24_RS01160 (QCF24_01160) | 217522..218118 | - | 597 | Protein_234 | conjugal transfer pilus-stabilizing protein TraP | - |
| QCF24_RS01165 (QCF24_01165) | 218111..219535 | - | 1425 | WP_023158013 | F-type conjugal transfer pilus assembly protein TraB | traB |
| QCF24_RS01170 (QCF24_01170) | 219535..220275 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| QCF24_RS01175 (QCF24_01175) | 220262..220828 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| QCF24_RS01180 (QCF24_01180) | 220848..221153 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| QCF24_RS01185 (QCF24_01185) | 221167..221535 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| QCF24_RS01190 (QCF24_01190) | 221597..221803 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| QCF24_RS01195 (QCF24_01195) | 221936..222655 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| QCF24_RS01200 (QCF24_01200) | 222855..223271 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QCF24_RS01205 (QCF24_01205) | 223662..224147 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| QCF24_RS01210 (QCF24_01210) | 224180..224509 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| QCF24_RS01215 (QCF24_01215) | 224542..225363 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| QCF24_RS01220 (QCF24_01220) | 226191..226754 | - | 564 | WP_004182054 | methyltransferase | - |
| QCF24_RS01225 (QCF24_01225) | 226802..228157 | - | 1356 | WP_004182052 | DUF3560 domain-containing protein | - |
| QCF24_RS01230 (QCF24_01230) | 228209..228439 | - | 231 | WP_001568051 | hypothetical protein | - |
| QCF24_RS01235 (QCF24_01235) | 228531..228758 | - | 228 | WP_004182050 | hypothetical protein | - |