T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 57431..79156
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PHA56_RS31270 (PHA56_31270) | 53189..53686 | - | 498 | WP_159041655 | RepA family replication protein | - |
| PHA56_RS31275 (PHA56_31275) | 54395..54646 | - | 252 | WP_064357964 | hypothetical protein | - |
| PHA56_RS31280 (PHA56_31280) | 54658..55191 | - | 534 | WP_096807525 | phospholipase D family protein | - |
| PHA56_RS31285 (PHA56_31285) | 55237..57429 | - | 2193 | WP_064357960 | F-type conjugative transfer protein TrbC | - |
| PHA56_RS31290 (PHA56_31290) | 57431..58522 | - | 1092 | WP_064357959 | thioredoxin fold domain-containing protein | trbB |
| PHA56_RS31295 (PHA56_31295) | 58533..59951 | - | 1419 | WP_071887238 | hypothetical protein | trbA |
| PHA56_RS31300 (PHA56_31300) | 60053..60676 | - | 624 | WP_064357957 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PHA56_RS31305 (PHA56_31305) | 60742..62886 | - | 2145 | WP_064357955 | DotA/TraY family protein | traY |
| PHA56_RS31310 (PHA56_31310) | 62928..63509 | - | 582 | WP_064357954 | conjugal transfer protein TraX | - |
| PHA56_RS31315 (PHA56_31315) | 63506..64702 | - | 1197 | WP_064357952 | conjugal transfer protein TraW | traW |
| PHA56_RS31320 (PHA56_31320) | 64712..67759 | - | 3048 | WP_189095616 | ATP-binding protein | traU |
| PHA56_RS31325 (PHA56_31325) | 67769..68332 | - | 564 | WP_064357949 | hypothetical protein | traT |
| PHA56_RS31330 (PHA56_31330) | 68376..68777 | - | 402 | WP_032440588 | DUF6750 family protein | traR |
| PHA56_RS31335 (PHA56_31335) | 68833..69366 | - | 534 | WP_064357947 | conjugal transfer protein TraQ | traQ |
| PHA56_RS31340 (PHA56_31340) | 69376..70095 | - | 720 | WP_064357945 | conjugal transfer protein TraP | traP |
| PHA56_RS31345 (PHA56_31345) | 70102..71430 | - | 1329 | WP_064357943 | conjugal transfer protein TraO | traO |
| PHA56_RS31350 (PHA56_31350) | 71434..72537 | - | 1104 | WP_081042499 | DotH/IcmK family type IV secretion protein | traN |
| PHA56_RS31355 (PHA56_31355) | 72548..73216 | - | 669 | WP_196548568 | DotI/IcmL/TraM family protein | traM |
| PHA56_RS31360 (PHA56_31360) | 73290..73643 | - | 354 | WP_064357942 | hypothetical protein | traL |
| PHA56_RS31365 (PHA56_31365) | 73677..76892 | - | 3216 | WP_271293008 | LPD7 domain-containing protein | - |
| PHA56_RS31370 (PHA56_31370) | 76910..77176 | - | 267 | WP_189095618 | IcmT/TraK family protein | traK |
| PHA56_RS31375 (PHA56_31375) | 77173..78360 | - | 1188 | WP_081042498 | plasmid transfer ATPase TraJ | virB11 |
| PHA56_RS31380 (PHA56_31380) | 78338..79156 | - | 819 | WP_064357938 | type IV secretory system conjugative DNA transfer family protein | traI |
| PHA56_RS31385 (PHA56_31385) | 79153..79617 | - | 465 | WP_225546581 | DotD/TraH family lipoprotein | - |
| PHA56_RS31390 (PHA56_31390) | 79643..80122 | - | 480 | WP_064357937 | lytic transglycosylase domain-containing protein | - |
| PHA56_RS31395 (PHA56_31395) | 80854..81081 | - | 228 | WP_032440573 | hypothetical protein | - |
| PHA56_RS31400 (PHA56_31400) | 81691..82533 | + | 843 | WP_032440572 | helix-turn-helix domain-containing protein | - |
| PHA56_RS31405 (PHA56_31405) | 82593..83522 | + | 930 | WP_064357981 | glycosyltransferase family 9 protein | - |
| PHA56_RS31410 (PHA56_31410) | 83515..84009 | + | 495 | WP_064357935 | molybdopterin-dependent oxidoreductase | - |