T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50512..76565
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCF14_RS26710 | 50512..52665 | - | 2154 | WP_099588239 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CCF14_RS26715 | 53084..53677 | - | 594 | WP_232529617 | hypothetical protein | - |
| CCF14_RS26720 | 53887..54198 | + | 312 | WP_019842747 | heavy metal-binding domain-containing protein | - |
| CCF14_RS26725 | 54201..57020 | - | 2820 | WP_099588241 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CCF14_RS26730 | 57017..58342 | - | 1326 | WP_019842713 | conjugal transfer pilus assembly protein TraH | traH |
| CCF14_RS26735 | 58823..59353 | - | 531 | WP_089633479 | hypothetical protein | - |
| CCF14_RS26740 | 59368..59910 | - | 543 | WP_099588242 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CCF14_RS26745 | 59897..60181 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CCF14_RS26750 | 60299..60646 | - | 348 | WP_019842709 | conjugal transfer protein TrbA | - |
| CCF14_RS26755 | 60662..61405 | - | 744 | WP_157760421 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CCF14_RS26760 | 61398..61655 | - | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| CCF14_RS26765 | 61682..63490 | - | 1809 | WP_099588244 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CCF14_RS26770 | 63487..64125 | - | 639 | WP_099588245 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CCF14_RS26775 | 64134..65126 | - | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| CCF14_RS26780 | 65123..65755 | - | 633 | WP_099588246 | type-F conjugative transfer system protein TraW | traW |
| CCF14_RS26785 | 65752..66138 | - | 387 | WP_099588247 | type-F conjugative transfer system protein TrbI | - |
| CCF14_RS26790 | 66135..68708 | - | 2574 | WP_099588248 | type IV secretion system protein TraC | virb4 |
| CCF14_RS26795 | 68761..70332 | - | 1572 | WP_000381395 | IS66-like element ISCro1 family transposase | - |
| CCF14_RS26800 | 70352..70699 | - | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| CCF14_RS26805 | 70699..71376 | - | 678 | WP_001682408 | IS66-like element accessory protein TnpA | - |
| CCF14_RS26810 | 71629..71850 | - | 222 | WP_001278690 | conjugal transfer protein TraR | - |
| CCF14_RS26815 | 71985..72500 | - | 516 | WP_000809905 | type IV conjugative transfer system lipoprotein TraV | traV |
| CCF14_RS26820 | 72497..72748 | - | 252 | WP_077543400 | conjugal transfer protein TrbG | - |
| CCF14_RS26825 | 72760..72957 | - | 198 | WP_019842703 | conjugal transfer protein TrbD | - |
| CCF14_RS26830 | 72944..73534 | - | 591 | WP_099588249 | conjugal transfer pilus-stabilizing protein TraP | - |
| CCF14_RS26835 | 73524..74951 | - | 1428 | WP_099588250 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CCF14_RS26840 | 74951..75679 | - | 729 | WP_019842729 | type-F conjugative transfer system secretin TraK | traK |
| CCF14_RS26845 | 75666..76232 | - | 567 | WP_099588205 | type IV conjugative transfer system protein TraE | traE |
| CCF14_RS26850 | 76254..76565 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| CCF14_RS26855 | 76580..76939 | - | 360 | WP_019842731 | type IV conjugative transfer system pilin TraA | - |
| CCF14_RS26860 | 76973..77200 | - | 228 | WP_019842732 | conjugal transfer relaxosome protein TraY | - |
| CCF14_RS26865 | 77319..77966 | - | 648 | WP_099588251 | transcriptional regulator TraJ family protein | - |
| CCF14_RS26870 | 78161..78544 | - | 384 | WP_019842734 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CCF14_RS26875 | 78820..79467 | + | 648 | WP_157760422 | transglycosylase SLT domain-containing protein | - |
| CCF14_RS26880 | 79762..80583 | - | 822 | WP_157760423 | DUF932 domain-containing protein | - |
| CCF14_RS28920 | 80702..80987 | - | 286 | Protein_78 | hypothetical protein | - |
| CCF14_RS28925 | 81005..81298 | + | 294 | Protein_79 | hypothetical protein | - |