T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 20900..31228
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUW94_RS30880 (LUW94_30880) | 16177..17013 | - | 837 | WP_040119816 | branched-chain amino acid ABC transporter permease | - |
| LUW94_RS30885 (LUW94_30885) | 17027..18181 | - | 1155 | WP_049101017 | substrate-binding protein | - |
| LUW94_RS30890 (LUW94_30890) | 18178..19092 | - | 915 | WP_049101016 | nitrilase family protein | - |
| LUW94_RS31255 | 19430..19678 | - | 249 | WP_305955805 | hypothetical protein | - |
| LUW94_RS30895 (LUW94_30895) | 19660..20640 | - | 981 | WP_032216024 | IS5-like element ISKpn26 family transposase | - |
| LUW94_RS30900 (LUW94_30900) | 20754..20900 | - | 147 | Protein_23 | phospholipase D family protein | - |
| LUW94_RS30905 (LUW94_30905) | 20900..21895 | - | 996 | WP_012561144 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LUW94_RS30910 (LUW94_30910) | 21937..23097 | - | 1161 | WP_012561145 | type IV secretion system protein VirB10 | virB10 |
| LUW94_RS30915 (LUW94_30915) | 23097..23981 | - | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| LUW94_RS30920 (LUW94_30920) | 23992..24690 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| LUW94_RS31260 | 24680..24838 | - | 159 | WP_012561180 | hypothetical protein | - |
| LUW94_RS30925 (LUW94_30925) | 24909..25949 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| LUW94_RS30930 (LUW94_30930) | 25965..26192 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| LUW94_RS30935 (LUW94_30935) | 26200..26913 | - | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| LUW94_RS30940 (LUW94_30940) | 26931..29531 | - | 2601 | WP_012561149 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| LUW94_RS30945 (LUW94_30945) | 29531..29848 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| LUW94_RS30950 (LUW94_30950) | 29898..30191 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| LUW94_RS30955 (LUW94_30955) | 30201..30482 | - | 282 | WP_016338364 | transcriptional repressor KorA | - |
| LUW94_RS30960 (LUW94_30960) | 30491..31228 | - | 738 | WP_013279384 | lytic transglycosylase domain-containing protein | virB1 |
| LUW94_RS30965 (LUW94_30965) | 31337..31642 | + | 306 | WP_012561154 | H-NS family nucleoid-associated regulatory protein | - |
| LUW94_RS30970 (LUW94_30970) | 31658..32002 | + | 345 | WP_012561155 | hypothetical protein | - |
| LUW94_RS30975 (LUW94_30975) | 31999..32313 | + | 315 | WP_016338363 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LUW94_RS30980 (LUW94_30980) | 32349..32660 | + | 312 | WP_013279382 | hypothetical protein | - |
| LUW94_RS30985 (LUW94_30985) | 32716..33357 | + | 642 | WP_012561158 | restriction endonuclease | - |
| LUW94_RS30990 (LUW94_30990) | 33362..33568 | + | 207 | WP_001749967 | hypothetical protein | - |
| LUW94_RS30995 (LUW94_30995) | 33579..33851 | - | 273 | Protein_43 | IS1 family transposase | - |
| LUW94_RS31000 (LUW94_31000) | 33950..35383 | + | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |