T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5404..18915
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUW95_RS30080 (LUW95_30080) | 1340..1804 | + | 465 | Protein_1 | Tn3 family transposase | - |
| LUW95_RS30085 (LUW95_30085) | 2506..3207 | - | 702 | WP_269756048 | RepA family replication protein | - |
| LUW95_RS30090 (LUW95_30090) | 3692..4030 | - | 339 | WP_306460784 | helix-turn-helix domain-containing protein | - |
| LUW95_RS30095 (LUW95_30095) | 4321..4776 | + | 456 | WP_009309974 | transcription termination/antitermination NusG family protein | - |
| LUW95_RS30100 (LUW95_30100) | 4848..5063 | + | 216 | WP_004178170 | hypothetical protein | - |
| LUW95_RS30105 (LUW95_30105) | 5068..5286 | + | 219 | WP_004178172 | hypothetical protein | - |
| LUW95_RS30110 (LUW95_30110) | 5404..6114 | + | 711 | WP_004178175 | lytic transglycosylase domain-containing protein | virB1 |
| LUW95_RS30115 (LUW95_30115) | 6111..6416 | + | 306 | WP_012457109 | TrbC/VirB2 family protein | virB2 |
| LUW95_RS30120 (LUW95_30120) | 6429..9167 | + | 2739 | WP_047502599 | VirB3 family type IV secretion system protein | virb4 |
| LUW95_RS30125 (LUW95_30125) | 9185..9886 | + | 702 | WP_101863219 | type IV secretion system protein | - |
| LUW95_RS30130 (LUW95_30130) | 9898..10122 | + | 225 | WP_032152566 | EexN family lipoprotein | - |
| LUW95_RS30135 (LUW95_30135) | 10135..11205 | + | 1071 | WP_023316380 | type IV secretion system protein | virB6 |
| LUW95_RS30140 (LUW95_30140) | 11427..12110 | + | 684 | WP_023316381 | type IV secretion system protein | virB8 |
| LUW95_RS30145 (LUW95_30145) | 12107..13015 | + | 909 | WP_077763931 | P-type conjugative transfer protein VirB9 | virB9 |
| LUW95_RS30150 (LUW95_30150) | 13059..14309 | + | 1251 | WP_032152567 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| LUW95_RS30155 (LUW95_30155) | 14299..15324 | + | 1026 | WP_000125558 | P-type DNA transfer ATPase VirB11 | virB11 |
| LUW95_RS30160 (LUW95_30160) | 15321..15719 | + | 399 | WP_071841197 | cag pathogenicity island Cag12 family protein | - |
| LUW95_RS30165 (LUW95_30165) | 15755..16060 | + | 306 | WP_012457118 | hypothetical protein | - |
| LUW95_RS30170 (LUW95_30170) | 16094..16399 | + | 306 | WP_032152569 | hypothetical protein | - |
| LUW95_RS30175 (LUW95_30175) | 17179..18915 | + | 1737 | WP_032152570 | type IV secretory system conjugative DNA transfer family protein | virb4 |
| LUW95_RS30180 (LUW95_30180) | 18924..19679 | + | 756 | WP_023316386 | MobC family replication-relaxation protein | - |
| LUW95_RS30185 (LUW95_30185) | 19716..20189 | + | 474 | WP_023316387 | thermonuclease family protein | - |
| LUW95_RS30190 (LUW95_30190) | 20295..20591 | + | 297 | WP_086814137 | hypothetical protein | - |
| LUW95_RS30195 (LUW95_30195) | 20629..20862 | - | 234 | WP_004178129 | hypothetical protein | - |
| LUW95_RS30200 (LUW95_30200) | 20903..21550 | - | 648 | WP_004178130 | ParA family protein | - |
| LUW95_RS30205 (LUW95_30205) | 21670..22419 | - | 750 | Protein_26 | SprT-like domain-containing protein | - |
| LUW95_RS30210 (LUW95_30210) | 22578..23162 | + | 585 | WP_009309957 | recombinase family protein | - |