T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 115360..140503
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM403_RS20470 (AM403_20470) | 111391..111624 | - | 234 | WP_001191890 | hypothetical protein | - |
| AM403_RS20475 (AM403_20475) | 111606..112223 | - | 618 | WP_001249395 | hypothetical protein | - |
| AM403_RS20480 (AM403_20480) | 112391..115363 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| AM403_RS20485 (AM403_20485) | 115360..117225 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| AM403_RS20490 (AM403_20490) | 117275..117820 | + | 546 | WP_000228720 | hypothetical protein | - |
| AM403_RS20495 (AM403_20495) | 117777..118406 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| AM403_RS21535 | 118454..118630 | + | 177 | WP_169342285 | hypothetical protein | - |
| AM403_RS20505 (AM403_20505) | 118872..119249 | + | 378 | WP_000869297 | hypothetical protein | - |
| AM403_RS20510 (AM403_20510) | 119249..119911 | + | 663 | WP_001231464 | hypothetical protein | - |
| AM403_RS21540 | 120092..120235 | + | 144 | WP_001275801 | hypothetical protein | - |
| AM403_RS20515 (AM403_20515) | 120247..120612 | + | 366 | WP_001052530 | hypothetical protein | - |
| AM403_RS20520 (AM403_20520) | 120757..121038 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| AM403_RS20525 (AM403_20525) | 121035..121661 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| AM403_RS20530 (AM403_20530) | 121645..122562 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| AM403_RS20535 (AM403_20535) | 122562..123875 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| AM403_RS20540 (AM403_20540) | 123872..124450 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM403_RS20545 (AM403_20545) | 124454..124846 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| AM403_RS20550 (AM403_20550) | 125047..130533 | + | 5487 | WP_000606835 | Ig-like domain-containing protein | - |
| AM403_RS20555 (AM403_20555) | 130682..131389 | + | 708 | WP_001259346 | DsbC family protein | - |
| AM403_RS20560 (AM403_20560) | 131386..133833 | + | 2448 | WP_000637384 | type IV secretion system protein TraC | virb4 |
| AM403_RS20565 (AM403_20565) | 133848..134165 | + | 318 | WP_000351984 | hypothetical protein | - |
| AM403_RS20570 (AM403_20570) | 134162..134692 | + | 531 | WP_001010740 | S26 family signal peptidase | - |
| AM403_RS20575 (AM403_20575) | 134655..135920 | + | 1266 | WP_001447719 | TrbC family F-type conjugative pilus assembly protein | traW |
| AM403_RS20580 (AM403_20580) | 135917..136588 | + | 672 | WP_000575345 | EAL domain-containing protein | - |
| AM403_RS20585 (AM403_20585) | 136588..137592 | + | 1005 | WP_005507569 | TraU family protein | traU |
| AM403_RS20590 (AM403_20590) | 137708..140503 | + | 2796 | WP_001256484 | conjugal transfer mating pair stabilization protein TraN | traN |
| AM403_RS20595 (AM403_20595) | 140542..141402 | - | 861 | WP_000709517 | hypothetical protein | - |
| AM403_RS20600 (AM403_20600) | 141525..142166 | - | 642 | WP_000796664 | hypothetical protein | - |
| AM403_RS20605 (AM403_20605) | 142461..142781 | + | 321 | WP_000547566 | hypothetical protein | - |
| AM403_RS20610 (AM403_20610) | 143085..143270 | + | 186 | WP_001186917 | hypothetical protein | - |
| AM403_RS20615 (AM403_20615) | 143490..144458 | + | 969 | WP_000085160 | AAA family ATPase | - |
| AM403_RS20620 (AM403_20620) | 144469..145377 | + | 909 | WP_000739139 | hypothetical protein | - |