T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 30544..57750
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ55_RS24805 (LFZ55_24805) | 29910..30137 | + | 228 | WP_000450263 | toxin-antitoxin system antitoxin VapB | - |
| LFZ55_RS24810 (LFZ55_24810) | 30137..30535 | + | 399 | WP_058215171 | type II toxin-antitoxin system VapC family toxin | - |
| LFZ55_RS24815 (LFZ55_24815) | 30544..32787 | - | 2244 | WP_088734824 | type IV conjugative transfer system coupling protein TraD | prgC |
| LFZ55_RS24820 (LFZ55_24820) | 33164..33895 | - | 732 | WP_011282396 | conjugal transfer complement resistance protein TraT | - |
| LFZ55_RS24825 (LFZ55_24825) | 34141..34623 | - | 483 | WP_000787664 | hypothetical protein | - |
| LFZ55_RS24830 (LFZ55_24830) | 34645..37467 | - | 2823 | WP_088734826 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LFZ55_RS24835 (LFZ55_24835) | 37464..38846 | - | 1383 | WP_088734828 | conjugal transfer pilus assembly protein TraH | traH |
| LFZ55_RS24840 (LFZ55_24840) | 38836..39384 | - | 549 | WP_000055842 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LFZ55_RS24845 (LFZ55_24845) | 39371..39664 | - | 294 | WP_001233882 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LFZ55_RS24850 (LFZ55_24850) | 39878..40621 | - | 744 | WP_001227834 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LFZ55_RS24855 (LFZ55_24855) | 40634..40849 | - | 216 | WP_001220322 | conjugal transfer protein TrbE | - |
| LFZ55_RS24860 (LFZ55_24860) | 40860..41336 | - | 477 | WP_001746543 | hypothetical protein | - |
| LFZ55_RS24865 (LFZ55_24865) | 41347..43173 | - | 1827 | WP_088734830 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LFZ55_RS24870 (LFZ55_24870) | 43170..43551 | - | 382 | Protein_46 | HNH endonuclease signature motif containing protein | - |
| LFZ55_RS24875 (LFZ55_24875) | 43588..44226 | - | 639 | WP_088734832 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LFZ55_RS24880 (LFZ55_24880) | 44211..44519 | - | 309 | WP_088734833 | hypothetical protein | - |
| LFZ55_RS24885 (LFZ55_24885) | 44538..45524 | - | 987 | WP_058108413 | conjugal transfer pilus assembly protein TraU | traU |
| LFZ55_RS24890 (LFZ55_24890) | 45521..46153 | - | 633 | WP_088734835 | type-F conjugative transfer system protein TraW | traW |
| LFZ55_RS24895 (LFZ55_24895) | 46150..46536 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| LFZ55_RS24900 (LFZ55_24900) | 46511..49159 | - | 2649 | WP_088734837 | type IV secretion system protein TraC | virb4 |
| LFZ55_RS24905 (LFZ55_24905) | 49175..49558 | - | 384 | WP_042827805 | hypothetical protein | - |
| LFZ55_RS24910 (LFZ55_24910) | 49555..50022 | - | 468 | WP_088734839 | hypothetical protein | - |
| LFZ55_RS24915 (LFZ55_24915) | 50015..50236 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| LFZ55_RS24920 (LFZ55_24920) | 50371..50886 | - | 516 | WP_088734841 | type IV conjugative transfer system lipoprotein TraV | traV |
| LFZ55_RS24925 (LFZ55_24925) | 50883..51128 | - | 246 | WP_088734843 | DUF2689 domain-containing protein | - |
| LFZ55_RS24930 (LFZ55_24930) | 51106..51642 | - | 537 | WP_088734859 | conjugal transfer pilus-stabilizing protein TraP | - |
| LFZ55_RS24935 (LFZ55_24935) | 51674..53053 | - | 1380 | WP_088734845 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LFZ55_RS24940 (LFZ55_24940) | 53053..53793 | - | 741 | WP_088734847 | type-F conjugative transfer system secretin TraK | traK |
| LFZ55_RS24945 (LFZ55_24945) | 53780..54346 | - | 567 | WP_021003395 | type IV conjugative transfer system protein TraE | traE |
| LFZ55_RS24950 (LFZ55_24950) | 54368..54679 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| LFZ55_RS24955 (LFZ55_24955) | 54694..55056 | - | 363 | WP_001274202 | type IV conjugative transfer system pilin TraA | - |
| LFZ55_RS24960 (LFZ55_24960) | 55098..55493 | - | 396 | WP_001674566 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| LFZ55_RS24965 (LFZ55_24965) | 55592..56281 | - | 690 | WP_079841988 | conjugal transfer transcriptional regulator TraJ | - |
| LFZ55_RS24970 (LFZ55_24970) | 56476..56856 | - | 381 | WP_001151568 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LFZ55_RS24975 (LFZ55_24975) | 57280..57750 | + | 471 | WP_088734861 | transglycosylase SLT domain-containing protein | virB1 |
| LFZ55_RS24980 (LFZ55_24980) | 58061..58869 | - | 809 | Protein_68 | DUF932 domain-containing protein | - |
| LFZ55_RS25545 | 58973..59131 | - | 159 | WP_001704449 | hypothetical protein | - |
| LFZ55_RS25970 | 59217..59345 | - | 129 | WP_269768501 | hypothetical protein | - |
| LFZ55_RS24985 (LFZ55_24985) | 59380..60117 | - | 738 | WP_088734849 | plasmid SOS inhibition protein A | - |
| LFZ55_RS24990 (LFZ55_24990) | 60114..60503 | - | 390 | WP_088734851 | DUF1380 family protein | - |
| LFZ55_RS24995 (LFZ55_24995) | 60544..61224 | - | 681 | WP_088734853 | DNA methylase | - |
| LFZ55_RS25000 (LFZ55_25000) | 61774..62634 | - | 861 | WP_001077699 | RepB family plasmid replication initiator protein | - |