T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 17533..43842
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO1_RS25780 (APECO1_O1CoBM17) | 13497..13931 | + | 435 | WP_000845949 | conjugation system SOS inhibitor PsiB | - |
| APECO1_RS25785 (APECO1_O1CoBM18) | 13928..14690 | + | 763 | Protein_18 | plasmid SOS inhibition protein A | - |
| APECO1_RS31660 (APECO1_O1CoBM19) | 14659..14847 | - | 189 | WP_001299721 | hypothetical protein | - |
| APECO1_RS32130 (APECO1_O1CoBM20) | 14869..15018 | + | 150 | Protein_20 | plasmid maintenance protein Mok | - |
| APECO1_RS25795 (APECO1_O1CoBM20) | 14960..15085 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| APECO1_RS32135 | 15305..15535 | + | 231 | WP_001426396 | hypothetical protein | - |
| APECO1_RS32140 | 15533..15706 | - | 174 | Protein_23 | hypothetical protein | - |
| APECO1_RS30720 | 15776..15982 | + | 207 | WP_000547939 | hypothetical protein | - |
| APECO1_RS25805 (APECO1_O1CoBM23) | 16007..16294 | + | 288 | WP_000107535 | hypothetical protein | - |
| APECO1_RS25810 (APECO1_O1CoBM24) | 16415..17236 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| APECO1_RS25815 (APECO1_O1CoBM25) | 17533..18135 | - | 603 | WP_000243709 | transglycosylase SLT domain-containing protein | virB1 |
| APECO1_RS25820 (APECO1_O1CoBM26) | 18456..18839 | + | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| APECO1_RS25825 (APECO1_O1CoBM27) | 19026..19715 | + | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| APECO1_RS25830 (APECO1_O1CoBM28) | 19808..20209 | + | 402 | WP_012006553 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| APECO1_RS25835 (APECO1_O1CoBM29) | 20242..20607 | + | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| APECO1_RS25840 (APECO1_O1CoBM30) | 20622..20933 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| APECO1_RS25845 (APECO1_O1CoBM31) | 20955..21521 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| APECO1_RS25850 (APECO1_O1CoBM32) | 21508..22236 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| APECO1_RS25855 (APECO1_O1CoBM33) | 22236..23663 | + | 1428 | WP_000146692 | F-type conjugal transfer pilus assembly protein TraB | traB |
| APECO1_RS25860 (APECO1_O1CoBM34) | 23653..24243 | + | 591 | WP_000002792 | conjugal transfer pilus-stabilizing protein TraP | - |
| APECO1_RS25865 (APECO1_O1CoBM35) | 24230..24427 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| APECO1_RS25870 (APECO1_O1CoBM36) | 24439..24690 | + | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| APECO1_RS25875 (APECO1_O1CoBM37) | 24687..25202 | + | 516 | WP_000809841 | type IV conjugative transfer system lipoprotein TraV | traV |
| APECO1_RS29740 (APECO1_O1CoBM38) | 25337..25558 | + | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| APECO1_RS25885 (APECO1_O1CoBM39) | 25718..28345 | + | 2628 | WP_001064247 | type IV secretion system protein TraC | virb4 |
| APECO1_RS25890 (APECO1_O1CoBM40) | 28342..28728 | + | 387 | WP_000097319 | type-F conjugative transfer system protein TrbI | - |
| APECO1_RS25895 (APECO1_O1CoBM41) | 28725..29357 | + | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| APECO1_RS25900 (APECO1_O1CoBM42) | 29354..30346 | + | 993 | WP_000830187 | conjugal transfer pilus assembly protein TraU | traU |
| APECO1_RS25905 (APECO1_O1CoBM43) | 30355..30993 | + | 639 | WP_000777688 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| APECO1_RS25910 (APECO1_O1CoBM44) | 30990..32798 | + | 1809 | WP_000821847 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| APECO1_RS25915 (APECO1_O1CoBM45) | 32825..33082 | + | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| APECO1_RS25920 (APECO1_O1CoBM46) | 33075..33818 | + | 744 | WP_001030367 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| APECO1_RS25925 (APECO1_O1CoBM47) | 33834..34181 | + | 348 | WP_001287911 | conjugal transfer protein TrbA | - |
| APECO1_RS25930 (APECO1_O1CoBM48) | 34183..34458 | - | 276 | WP_001513501 | hypothetical protein | - |
| APECO1_RS25935 (APECO1_O1CoBM49) | 34584..34820 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| APECO1_RS25940 (APECO1_O1CoBM50) | 34807..35352 | + | 546 | WP_000059833 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| APECO1_RS29745 (APECO1_O1CoBM51) | 35282..35623 | + | 342 | WP_001442101 | P-type conjugative transfer protein TrbJ | - |
| APECO1_RS32145 | 35610..36002 | + | 393 | Protein_54 | F-type conjugal transfer protein TrbF | - |
| APECO1_RS29755 | 35989..37363 | + | 1375 | Protein_55 | conjugal transfer pilus assembly protein TraH | - |
| APECO1_RS25950 (APECO1_O1CoBM53) | 37360..40185 | + | 2826 | WP_001007037 | conjugal transfer mating-pair stabilization protein TraG | traG |
| APECO1_RS25955 (APECO1_O1CoBM54) | 40182..40691 | + | 510 | WP_000628107 | conjugal transfer entry exclusion protein TraS | - |
| APECO1_RS25960 (APECO1_O1CoBM55) | 40705..41436 | + | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| APECO1_RS25965 (APECO1_O1CoBM56) | 41689..43842 | + | 2154 | WP_000009325 | type IV conjugative transfer system coupling protein TraD | virb4 |
| APECO1_RS25970 | 43851..44249 | - | 399 | WP_000911333 | tRNA(fMet)-specific endonuclease VapC | - |
| APECO1_RS25975 | 44249..44476 | - | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |