T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34041..44329
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IDM42_RS26150 (IDM42_26140) | 31805..32380 | + | 576 | WP_000904911 | recombinase family protein | - |
| IDM42_RS26160 (IDM42_26150) | 33209..33520 | - | 312 | WP_000570332 | hypothetical protein | - |
| IDM42_RS26165 (IDM42_26155) | 33517..34029 | - | 513 | WP_029697418 | phospholipase D family protein | - |
| IDM42_RS26170 (IDM42_26160) | 34041..35042 | - | 1002 | WP_001076634 | ATPase, T2SS/T4P/T4SS family | virB11 |
| IDM42_RS26175 (IDM42_26165) | 35093..36226 | - | 1134 | WP_000101920 | type IV secretion system protein VirB10 | virB10 |
| IDM42_RS26180 (IDM42_26170) | 36226..37113 | - | 888 | WP_000758230 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| IDM42_RS26185 (IDM42_26175) | 37124..37819 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| IDM42_RS28735 | 37830..37961 | - | 132 | WP_032493177 | hypothetical protein | - |
| IDM42_RS26190 (IDM42_26180) | 38038..39075 | - | 1038 | WP_014014948 | type IV secretion system protein | virB6 |
| IDM42_RS26195 (IDM42_26185) | 39092..39334 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| IDM42_RS26200 (IDM42_26190) | 39344..40057 | - | 714 | WP_000644929 | type IV secretion system protein | virB5 |
| IDM42_RS26205 (IDM42_26195) | 40073..42646 | - | 2574 | WP_032493176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| IDM42_RS26210 (IDM42_26200) | 42647..42964 | - | 318 | WP_000462629 | VirB3 family type IV secretion system protein | virB3 |
| IDM42_RS26215 (IDM42_26205) | 43004..43345 | - | 342 | WP_001121032 | TrbC/VirB2 family protein | virB2 |
| IDM42_RS26220 (IDM42_26210) | 43547..44329 | - | 783 | WP_024562119 | lytic transglycosylase domain-containing protein | virB1 |
| IDM42_RS26225 (IDM42_26215) | 44429..44746 | + | 318 | WP_000960955 | H-NS family nucleoid-associated regulatory protein | - |
| IDM42_RS26230 (IDM42_26220) | 44750..45100 | + | 351 | WP_000528713 | hypothetical protein | - |
| IDM42_RS26235 (IDM42_26225) | 45097..45435 | + | 339 | WP_000040982 | hypothetical protein | - |
| IDM42_RS26240 (IDM42_26230) | 45439..45747 | + | 309 | WP_000733764 | hypothetical protein | - |
| IDM42_RS26245 (IDM42_26235) | 46032..46217 | + | 186 | WP_024562121 | ribbon-helix-helix domain-containing protein | - |
| IDM42_RS26250 (IDM42_26240) | 46214..46822 | - | 609 | WP_000275218 | recombinase family protein | - |
| IDM42_RS26255 (IDM42_26245) | 46988..47320 | - | 333 | WP_000140165 | hypothetical protein | - |