T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26166..54309
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IDM42_RS25170 (IDM42_25160) | 22138..22572 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| IDM42_RS25175 (IDM42_25165) | 22569..23288 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| IDM42_RS28535 | 23510..23659 | + | 150 | Protein_28 | plasmid maintenance protein Mok | - |
| IDM42_RS25180 (IDM42_25170) | 23601..23726 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| IDM42_RS25185 (IDM42_25175) | 24045..24341 | - | 297 | Protein_30 | hypothetical protein | - |
| IDM42_RS25190 (IDM42_25180) | 24641..24937 | + | 297 | WP_001272251 | hypothetical protein | - |
| IDM42_RS25195 (IDM42_25185) | 25048..25869 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| IDM42_RS25200 (IDM42_25190) | 26166..26756 | - | 591 | WP_000252683 | transglycosylase SLT domain-containing protein | virB1 |
| IDM42_RS25205 (IDM42_25195) | 27091..27474 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| IDM42_RS25210 (IDM42_25200) | 27668..28339 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| IDM42_RS25215 (IDM42_25205) | 28476..28703 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| IDM42_RS25220 (IDM42_25210) | 28736..29095 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| IDM42_RS25225 (IDM42_25215) | 29110..29421 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| IDM42_RS25230 (IDM42_25220) | 29443..30009 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| IDM42_RS25235 (IDM42_25225) | 29996..30724 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| IDM42_RS25240 (IDM42_25230) | 30724..32175 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| IDM42_RS25245 (IDM42_25235) | 32165..32731 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| IDM42_RS25250 (IDM42_25240) | 32718..33038 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| IDM42_RS25255 (IDM42_25245) | 33035..33550 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| IDM42_RS25260 (IDM42_25250) | 33685..33906 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| IDM42_RS25265 (IDM42_25255) | 33899..34375 | + | 477 | WP_000549587 | hypothetical protein | - |
| IDM42_RS25270 (IDM42_25260) | 34455..34673 | + | 219 | WP_000556745 | hypothetical protein | - |
| IDM42_RS25275 (IDM42_25265) | 34701..35048 | + | 348 | WP_000836682 | hypothetical protein | - |
| IDM42_RS25280 (IDM42_25270) | 35174..37804 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| IDM42_RS25285 (IDM42_25275) | 37801..38187 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| IDM42_RS25290 (IDM42_25280) | 38184..38816 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| IDM42_RS25295 (IDM42_25285) | 38813..39805 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| IDM42_RS25300 (IDM42_25290) | 39835..40140 | + | 306 | WP_000224416 | hypothetical protein | - |
| IDM42_RS25305 (IDM42_25295) | 40149..40787 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| IDM42_RS25310 (IDM42_25300) | 40784..42634 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| IDM42_RS25315 (IDM42_25305) | 42661..42918 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| IDM42_RS25320 (IDM42_25310) | 42905..43654 | + | 750 | WP_001336806 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| IDM42_RS25325 (IDM42_25315) | 43668..44012 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| IDM42_RS25330 (IDM42_25320) | 44131..44415 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IDM42_RS25335 (IDM42_25325) | 44402..44947 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| IDM42_RS25340 (IDM42_25330) | 44877..45224 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| IDM42_RS25345 (IDM42_25335) | 45205..45597 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| IDM42_RS25350 (IDM42_25340) | 45575..46957 | + | 1383 | WP_001309243 | conjugal transfer pilus assembly protein TraH | traH |
| IDM42_RS25355 (IDM42_25345) | 46954..49776 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| IDM42_RS25360 (IDM42_25350) | 49792..50277 | + | 486 | WP_000605870 | hypothetical protein | - |
| IDM42_RS25365 (IDM42_25355) | 50326..51057 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| IDM42_RS25370 (IDM42_25360) | 51260..51997 | + | 738 | WP_000199905 | hypothetical protein | - |
| IDM42_RS25375 (IDM42_25365) | 52048..54309 | + | 2262 | WP_046072940 | type IV conjugative transfer system coupling protein TraD | virb4 |