T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7115..23692
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VDS59_RS00020 (VDS59_11405) | 2505..2876 | + | 372 | Protein_3 | hypothetical protein | - |
| VDS59_RS00025 (VDS59_11410) | 2866..3144 | - | 279 | WP_082265514 | hypothetical protein | - |
| VDS59_RS00030 (VDS59_11415) | 3166..3375 | - | 210 | WP_082265513 | hypothetical protein | - |
| VDS59_RS00035 (VDS59_11420) | 3646..5709 | + | 2064 | WP_331764467 | MobQ family relaxase | - |
| VDS59_RS00040 (VDS59_11425) | 5793..6104 | + | 312 | WP_063846748 | hypothetical protein | - |
| VDS59_RS00045 (VDS59_11430) | 6140..6754 | + | 615 | WP_331764472 | hypothetical protein | - |
| VDS59_RS00050 (VDS59_11435) | 6756..7094 | + | 339 | WP_082265510 | CagC family type IV secretion system protein | - |
| VDS59_RS00055 (VDS59_11440) | 7115..7477 | + | 363 | WP_014216295 | hypothetical protein | trsC |
| VDS59_RS00060 (VDS59_11445) | 7446..8105 | + | 660 | WP_331764509 | TrsD/TraD family conjugative transfer protein | trsD |
| VDS59_RS00065 (VDS59_11450) | 8117..10132 | + | 2016 | WP_331764511 | helicase HerA domain-containing protein | virb4 |
| VDS59_RS00070 (VDS59_11455) | 10125..11543 | + | 1419 | WP_331764513 | type VII secretion protein EssB/YukC | trsF |
| VDS59_RS00075 (VDS59_11460) | 11544..12698 | + | 1155 | WP_331764515 | phage tail tip lysozyme | prgK |
| VDS59_RS00080 (VDS59_11465) | 12712..13329 | + | 618 | WP_331764517 | hypothetical protein | - |
| VDS59_RS00085 (VDS59_11470) | 13316..13684 | + | 369 | WP_331764519 | thioredoxin family protein | - |
| VDS59_RS00090 (VDS59_11475) | 13685..14155 | + | 471 | WP_331764521 | conjugal transfer protein | trsJ |
| VDS59_RS00095 (VDS59_11480) | 14157..15707 | + | 1551 | WP_331764523 | VirD4-like conjugal transfer protein, CD1115 family | - |
| VDS59_RS00100 (VDS59_11485) | 15722..16111 | + | 390 | WP_082265575 | hypothetical protein | - |
| VDS59_RS00105 (VDS59_11490) | 16130..16969 | + | 840 | WP_085763775 | conjugal transfer protein TrbL family protein | trsL |
| VDS59_RS00110 (VDS59_11495) | 16982..17392 | + | 411 | WP_085763774 | hypothetical protein | - |
| VDS59_RS00115 (VDS59_11500) | 17399..19534 | + | 2136 | WP_331764527 | DNA topoisomerase III | - |
| VDS59_RS00120 (VDS59_11505) | 19656..19871 | + | 216 | WP_110140172 | hypothetical protein | - |
| VDS59_RS00125 (VDS59_11510) | 19875..20999 | + | 1125 | WP_331764528 | ArdC-like ssDNA-binding domain-containing protein | - |
| VDS59_RS00130 (VDS59_11515) | 21155..21244 | - | 90 | WP_072672334 | putative holin-like toxin | - |
| VDS59_RS00135 (VDS59_11520) | 21430..21576 | - | 147 | WP_255033705 | restriction endonuclease subunit S | - |
| VDS59_RS00140 (VDS59_11525) | 21809..23692 | - | 1884 | WP_331764550 | collagen-binding domain-containing protein | prgC |
| VDS59_RS00145 (VDS59_11530) | 23822..24925 | + | 1104 | WP_216754759 | AraC family transcriptional regulator | - |
| VDS59_RS00150 (VDS59_11535) | 24975..25904 | - | 930 | WP_011666862 | IS30-like element ISLpl1 family transposase | - |
| VDS59_RS00155 (VDS59_11540) | 26219..27595 | - | 1377 | WP_112304354 | FAD-dependent oxidoreductase | - |