T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 14843..25168
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R1221_RS22615 (R1221_22615) | 10070..10615 | + | 546 | WP_001493763 | plasmid pRiA4b ORF-3 family protein | - |
| R1221_RS22620 (R1221_22620) | 10752..11324 | + | 573 | WP_001493762 | recombinase family protein | - |
| R1221_RS22625 (R1221_22625) | 11361..12752 | + | 1392 | WP_014839878 | ISKra4-like element ISKpn19 family transposase | - |
| R1221_RS22630 (R1221_22630) | 12911..13608 | + | 698 | WP_095033700 | IS1-like element IS1B family transposase | - |
| R1221_RS22635 (R1221_22635) | 13849..14136 | + | 288 | Protein_15 | DUF6710 family protein | - |
| R1221_RS22640 (R1221_22640) | 14310..14843 | - | 534 | WP_000792636 | phospholipase D family protein | - |
| R1221_RS22645 (R1221_22645) | 14843..15838 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| R1221_RS22650 (R1221_22650) | 15880..17040 | - | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| R1221_RS22655 (R1221_22655) | 17040..17924 | - | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| R1221_RS22660 (R1221_22660) | 17935..18633 | - | 699 | WP_000646594 | virB8 family protein | virB8 |
| R1221_RS22900 | 18623..18781 | - | 159 | WP_012561180 | hypothetical protein | - |
| R1221_RS22665 (R1221_22665) | 18852..19892 | - | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| R1221_RS22670 (R1221_22670) | 19908..20135 | - | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| R1221_RS22675 (R1221_22675) | 20143..20856 | - | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| R1221_RS22680 (R1221_22680) | 20874..23342 | - | 2469 | WP_224743086 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| R1221_RS22685 (R1221_22685) | 23474..23791 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| R1221_RS22690 (R1221_22690) | 23841..24134 | - | 294 | WP_001749962 | hypothetical protein | virB2 |
| R1221_RS22695 (R1221_22695) | 24144..24425 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| R1221_RS22700 (R1221_22700) | 24434..25168 | - | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| R1221_RS22705 (R1221_22705) | 25211..25582 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| R1221_RS22710 (R1221_22710) | 25598..25942 | + | 345 | WP_001749964 | hypothetical protein | - |
| R1221_RS22715 (R1221_22715) | 25939..26253 | + | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| R1221_RS22720 (R1221_22720) | 26289..26600 | + | 312 | WP_001452736 | hypothetical protein | - |
| R1221_RS22725 (R1221_22725) | 26650..27297 | + | 648 | WP_015344958 | restriction endonuclease | - |
| R1221_RS22730 (R1221_22730) | 27302..27508 | + | 207 | WP_001749967 | hypothetical protein | - |
| R1221_RS22735 (R1221_22735) | 27519..27791 | - | 273 | Protein_36 | IS1 family transposase | - |
| R1221_RS22740 (R1221_22740) | 27890..29323 | + | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |