T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 44761..53929
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STY_RS23920 (HCM1.62c) | 40298..40498 | - | 201 | WP_000357614 | hypothetical protein | - |
| STY_RS23925 (HCM1.63c) | 40516..41592 | - | 1077 | WP_001015069 | hypothetical protein | - |
| STY_RS23930 (HCM1.64) | 42127..43002 | + | 876 | WP_001282731 | RepB family plasmid replication initiator protein | - |
| STY_RS23935 | 43449..43793 | - | 345 | WP_153253765 | hypothetical protein | - |
| STY_RS23940 (HCM1.67) | 44356..44709 | + | 354 | WP_000424120 | pili assembly chaperone | - |
| STY_RS23945 (HCM1.69) | 44761..45078 | + | 318 | WP_000203871 | type IV conjugative transfer system protein TraL | traL |
| STY_RS23950 (HCM1.70) | 45090..45875 | + | 786 | WP_000771920 | TraE/TraK family type IV conjugative transfer system protein | traE |
| STY_RS23955 (HCM1.71) | 45878..47110 | + | 1233 | WP_000202110 | type-F conjugative transfer system secretin TraK | traK |
| STY_RS23960 (HCM1.72) | 47112..47552 | + | 441 | WP_001224093 | plasmid transfer protein HtdO | - |
| STY_RS23965 (HCM1.73) | 47542..48900 | + | 1359 | WP_000351840 | IncHI-type conjugal transfer protein TrhB | traB |
| STY_RS23970 (HCM1.74) | 48909..49421 | + | 513 | WP_000429933 | hypothetical protein | - |
| STY_RS23975 (HCM1.75) | 49527..50279 | + | 753 | WP_010892304 | protein-disulfide isomerase HtdT | - |
| STY_RS23980 (HCM1.76) | 50289..51239 | + | 951 | WP_001022266 | TraV family lipoprotein | traV |
| STY_RS23985 (HCM1.77) | 51248..53929 | + | 2682 | WP_001255538 | IncHI-type conjugal transfer ATPase TrhC | virb4 |
| STY_RS25695 | 54602..55024 | + | 423 | WP_144314410 | hypothetical protein | - |
| STY_RS23995 | 55702..55875 | + | 174 | WP_153801876 | hypothetical protein | - |
| STY_RS24000 | 55906..56298 | + | 393 | WP_164920269 | hypothetical protein | - |
| STY_RS24005 (HCM1.86) | 56742..57995 | + | 1254 | WP_001048869 | ParA family protein | - |