T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 149377..159047
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| At12D1_RS26125 (At12D1_50350) | 144897..145622 | - | 726 | WP_080868320 | nopaline ABC transporter permease NocM | - |
| At12D1_RS26130 (At12D1_50360) | 145624..146334 | - | 711 | WP_080868351 | nopaline ABC transporter permease NocQ | - |
| At12D1_RS26135 (At12D1_50370) | 146407..147258 | - | 852 | WP_003523898 | nopaline ABC transporter substrate-binding protein NocT | - |
| At12D1_RS26140 (At12D1_50380) | 147323..148096 | - | 774 | WP_080868321 | nopaline ABC transporter ATP-binding protein NocP | - |
| At12D1_RS26145 (At12D1_50390) | 148346..149248 | + | 903 | WP_045023359 | LysR family transcriptional regulator | - |
| At12D1_RS26150 (At12D1_50410) | 149377..150684 | - | 1308 | WP_080868322 | IncP-type conjugal transfer protein TrbI | virB10 |
| At12D1_RS26155 (At12D1_50420) | 150699..151175 | - | 477 | WP_045025162 | conjugal transfer protein TrbH | - |
| At12D1_RS26160 (At12D1_50430) | 151175..152029 | - | 855 | WP_070167554 | P-type conjugative transfer protein TrbG | virB9 |
| At12D1_RS26165 (At12D1_50440) | 152047..152709 | - | 663 | WP_080868323 | conjugal transfer protein TrbF | virB8 |
| At12D1_RS26170 (At12D1_50450) | 152716..153918 | - | 1203 | WP_080868324 | P-type conjugative transfer protein TrbL | virB6 |
| At12D1_RS26175 (At12D1_50460) | 153912..154130 | - | 219 | WP_070167519 | entry exclusion protein TrbK | - |
| At12D1_RS26180 (At12D1_50470) | 154127..154936 | - | 810 | WP_070167518 | P-type conjugative transfer protein TrbJ | virB5 |
| At12D1_RS26185 (At12D1_50480) | 154908..157376 | - | 2469 | WP_080868325 | conjugal transfer protein TrbE | virb4 |
| At12D1_RS26190 (At12D1_50490) | 157387..157686 | - | 300 | WP_080868326 | conjugal transfer protein TrbD | virB3 |
| At12D1_RS26195 (At12D1_50500) | 157679..158086 | - | 408 | WP_080868327 | conjugal transfer pilin TrbC | virB2 |
| At12D1_RS26200 (At12D1_50510) | 158076..159047 | - | 972 | WP_080868328 | P-type conjugative transfer ATPase TrbB | virB11 |
| At12D1_RS26205 (At12D1_50520) | 159044..159679 | - | 636 | WP_041723972 | acyl-homoserine-lactone synthase | - |