T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 115021..136168
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI63_RS00635 (LI63_00740) | 110244..110591 | + | 348 | WP_022644944 | hypothetical protein | - |
| LI63_RS00640 (LI63_00745) | 110684..110830 | + | 147 | WP_022644943 | hypothetical protein | - |
| LI63_RS27125 | 110878..111114 | + | 237 | Protein_136 | SAM-dependent DNA methyltransferase | - |
| LI63_RS00650 (LI63_00755) | 111463..112005 | + | 543 | WP_022644941 | antirestriction protein | - |
| LI63_RS00655 (LI63_00760) | 112029..112451 | - | 423 | WP_072205880 | transglycosylase SLT domain-containing protein | - |
| LI63_RS00660 (LI63_00765) | 112957..113349 | + | 393 | WP_022644939 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LI63_RS00665 (LI63_00770) | 113584..114285 | + | 702 | WP_022644938 | hypothetical protein | - |
| LI63_RS25305 | 114370..114570 | + | 201 | WP_032072063 | TraY domain-containing protein | - |
| LI63_RS00670 (LI63_00780) | 114639..115007 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LI63_RS00675 (LI63_00785) | 115021..115326 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LI63_RS00680 (LI63_00790) | 115346..115912 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LI63_RS00685 (LI63_00795) | 115899..116639 | + | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| LI63_RS00690 (LI63_00800) | 116639..118063 | + | 1425 | WP_022644937 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LI63_RS00695 (LI63_00805) | 118177..118761 | + | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| LI63_RS00700 (LI63_00810) | 118893..119303 | + | 411 | WP_004152499 | hypothetical protein | - |
| LI63_RS00705 (LI63_00815) | 119409..119627 | + | 219 | WP_004152501 | hypothetical protein | - |
| LI63_RS00710 (LI63_00820) | 119628..119939 | + | 312 | WP_004152502 | hypothetical protein | - |
| LI63_RS00715 (LI63_00825) | 120006..120410 | + | 405 | WP_004152503 | hypothetical protein | - |
| LI63_RS00720 (LI63_00830) | 120453..120842 | + | 390 | WP_004153076 | hypothetical protein | - |
| LI63_RS00725 (LI63_00835) | 120850..121248 | + | 399 | WP_011977783 | hypothetical protein | - |
| LI63_RS00730 (LI63_00840) | 121320..123959 | + | 2640 | WP_022644936 | type IV secretion system protein TraC | virb4 |
| LI63_RS00735 (LI63_00845) | 123959..124351 | + | 393 | WP_022644935 | type-F conjugative transfer system protein TrbI | - |
| LI63_RS00740 (LI63_00850) | 124348..124983 | + | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| LI63_RS00745 (LI63_00855) | 125018..125419 | + | 402 | WP_022644934 | hypothetical protein | - |
| LI63_RS00750 (LI63_00860) | 125416..126405 | + | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| LI63_RS00755 (LI63_00865) | 126418..127056 | + | 639 | WP_022644933 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LI63_RS00760 (LI63_00870) | 127115..129070 | + | 1956 | WP_022644932 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LI63_RS00765 (LI63_00875) | 129102..129356 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LI63_RS00770 (LI63_00880) | 129334..129582 | + | 249 | WP_022644931 | hypothetical protein | - |
| LI63_RS00775 (LI63_00885) | 129595..129921 | + | 327 | WP_004152676 | hypothetical protein | - |
| LI63_RS00780 (LI63_00890) | 129942..130694 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LI63_RS00785 (LI63_00895) | 130705..130944 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LI63_RS00790 (LI63_00900) | 130916..131473 | + | 558 | WP_022644930 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LI63_RS00795 (LI63_00905) | 131519..131962 | + | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| LI63_RS00800 (LI63_00910) | 131940..133319 | + | 1380 | WP_075995129 | conjugal transfer pilus assembly protein TraH | traH |
| LI63_RS00805 (LI63_00915) | 133319..136168 | + | 2850 | WP_004152624 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LI63_RS00810 (LI63_00920) | 136181..136729 | + | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| LI63_RS00815 (LI63_00925) | 136913..137644 | + | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| LI63_RS26865 | 137836..138525 | + | 690 | WP_022644928 | hypothetical protein | - |