T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 36317..61508
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK398_RS00215 (LK398_00215) | 32342..32575 | - | 234 | WP_001191892 | hypothetical protein | - |
| LK398_RS00220 (LK398_00220) | 32557..33174 | - | 618 | WP_001249396 | hypothetical protein | - |
| LK398_RS00225 (LK398_00225) | 33342..36320 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| LK398_RS00230 (LK398_00230) | 36317..38182 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| LK398_RS00235 (LK398_00235) | 38232..38777 | + | 546 | WP_000228720 | hypothetical protein | - |
| LK398_RS00240 (LK398_00240) | 38734..39363 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| LK398_RS00245 (LK398_00245) | 39411..39587 | + | 177 | WP_169342285 | hypothetical protein | - |
| LK398_RS00250 (LK398_00250) | 39829..40206 | + | 378 | WP_000869261 | hypothetical protein | - |
| LK398_RS00255 (LK398_00255) | 40206..40868 | + | 663 | WP_001231463 | hypothetical protein | - |
| LK398_RS00260 (LK398_00260) | 41049..41192 | + | 144 | WP_001275801 | hypothetical protein | - |
| LK398_RS00265 (LK398_00265) | 41204..41569 | + | 366 | WP_001052531 | hypothetical protein | - |
| LK398_RS00270 (LK398_00270) | 41714..41995 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| LK398_RS00275 (LK398_00275) | 41992..42618 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LK398_RS00280 (LK398_00280) | 42602..43519 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| LK398_RS00285 (LK398_00285) | 43519..44832 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| LK398_RS00290 (LK398_00290) | 44829..45407 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| LK398_RS00295 (LK398_00295) | 45411..45803 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| LK398_RS00300 (LK398_00300) | 46004..51535 | + | 5532 | WP_109829093 | Ig-like domain-containing protein | - |
| LK398_RS00305 (LK398_00305) | 51684..52391 | + | 708 | WP_001259347 | DsbC family protein | - |
| LK398_RS00310 (LK398_00310) | 52388..54835 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| LK398_RS00315 (LK398_00315) | 54850..55167 | + | 318 | WP_000351984 | hypothetical protein | - |
| LK398_RS00320 (LK398_00320) | 55164..55694 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| LK398_RS00325 (LK398_00325) | 55657..56922 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| LK398_RS00330 (LK398_00330) | 56919..57590 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| LK398_RS00335 (LK398_00335) | 57590..58594 | + | 1005 | WP_043940352 | TraU family protein | traU |
| LK398_RS00340 (LK398_00340) | 58710..61508 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| LK398_RS00345 (LK398_00345) | 61547..62407 | - | 861 | WP_000709517 | hypothetical protein | - |
| LK398_RS00350 (LK398_00350) | 62530..63171 | - | 642 | WP_000796664 | hypothetical protein | - |
| LK398_RS00355 (LK398_00355) | 63465..63785 | + | 321 | WP_000547566 | hypothetical protein | - |
| LK398_RS00360 (LK398_00360) | 64089..64274 | + | 186 | WP_001186917 | hypothetical protein | - |
| LK398_RS00365 (LK398_00365) | 64494..65462 | + | 969 | WP_000085162 | AAA family ATPase | - |
| LK398_RS00370 (LK398_00370) | 65473..66381 | + | 909 | WP_000739139 | hypothetical protein | - |