T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 84047..93222
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SmelRRI128_RS33640 (SmelRRI128_33640) | 79578..80537 | - | 960 | Protein_87 | transposase | - |
| SmelRRI128_RS33645 (SmelRRI128_33645) | 80557..80862 | - | 306 | WP_011971014 | hypothetical protein | - |
| SmelRRI128_RS33650 (SmelRRI128_33650) | 80862..82426 | - | 1565 | Protein_89 | IS66 family transposase | - |
| SmelRRI128_RS33655 (SmelRRI128_33655) | 82498..82845 | - | 348 | WP_011971016 | IS66 family insertion sequence element accessory protein TnpB | - |
| SmelRRI128_RS33660 (SmelRRI128_33660) | 83313..83504 | - | 192 | Protein_91 | IS5/IS1182 family transposase | - |
| SmelRRI128_RS33665 (SmelRRI128_33665) | 83448..83834 | + | 387 | WP_231198775 | DDE-type integrase/transposase/recombinase | - |
| SmelRRI128_RS33670 (SmelRRI128_33670) | 84047..85048 | - | 1002 | WP_231198768 | P-type DNA transfer ATPase VirB11 | virB11 |
| SmelRRI128_RS33675 (SmelRRI128_33675) | 85045..86241 | - | 1197 | WP_231198769 | TrbI/VirB10 family protein | virB10 |
| SmelRRI128_RS33680 (SmelRRI128_33680) | 86435..87217 | - | 783 | WP_231198770 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| SmelRRI128_RS33685 (SmelRRI128_33685) | 87245..87919 | - | 675 | WP_231198771 | virB8 family protein | virB8 |
| SmelRRI128_RS33690 (SmelRRI128_33690) | 88149..89261 | - | 1113 | WP_231198772 | type IV secretion system protein | virB6 |
| SmelRRI128_RS33695 (SmelRRI128_33695) | 89266..90066 | - | 801 | WP_231198695 | type IV secretion system protein | - |
| SmelRRI128_RS33700 (SmelRRI128_33700) | 90197..92491 | - | 2295 | WP_231198696 | DUF87 domain-containing protein | virb4 |
| SmelRRI128_RS33705 (SmelRRI128_33705) | 92550..92828 | - | 279 | WP_018009845 | VirB3 family type IV secretion system protein | virB3 |
| SmelRRI128_RS33710 (SmelRRI128_33710) | 92911..93222 | - | 312 | WP_093041803 | TrbC/VirB2 family protein | virB2 |
| SmelRRI128_RS33715 (SmelRRI128_33715) | 93262..94242 | - | 981 | WP_231198697 | lytic transglycosylase domain-containing protein | - |
| SmelRRI128_RS33720 (SmelRRI128_33720) | 94569..94690 | - | 122 | Protein_103 | IS256 family transposase | - |
| SmelRRI128_RS33725 (SmelRRI128_33725) | 94797..95042 | - | 246 | Protein_104 | IS6 family transposase | - |
| SmelRRI128_RS33730 (SmelRRI128_33730) | 95093..95275 | + | 183 | Protein_105 | transposase | - |
| SmelRRI128_RS33735 (SmelRRI128_33735) | 95412..97175 | - | 1764 | WP_231198698 | hypothetical protein | - |
| SmelRRI128_RS33740 (SmelRRI128_33740) | 97515..97772 | - | 258 | Protein_107 | transposase | - |