T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50862..59952
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R4T23_RS24135 (R4T23_24130) | 46893..47126 | - | 234 | WP_001191890 | hypothetical protein | - |
| R4T23_RS24140 (R4T23_24135) | 47108..47725 | - | 618 | WP_001249395 | hypothetical protein | - |
| R4T23_RS24145 (R4T23_24140) | 47893..50865 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| R4T23_RS24150 (R4T23_24145) | 50862..52727 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| R4T23_RS24155 (R4T23_24150) | 52777..53322 | + | 546 | WP_000228720 | hypothetical protein | - |
| R4T23_RS24160 (R4T23_24155) | 53279..53908 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| R4T23_RS24165 (R4T23_24160) | 53918..54364 | + | 447 | WP_000122507 | hypothetical protein | - |
| R4T23_RS24170 (R4T23_24165) | 54374..54751 | + | 378 | WP_000869297 | hypothetical protein | - |
| R4T23_RS24175 (R4T23_24170) | 54751..55413 | + | 663 | WP_001231464 | hypothetical protein | - |
| R4T23_RS24180 (R4T23_24175) | 55594..55737 | + | 144 | WP_001275801 | hypothetical protein | - |
| R4T23_RS24185 (R4T23_24180) | 55749..56114 | + | 366 | WP_001052530 | hypothetical protein | - |
| R4T23_RS24190 (R4T23_24185) | 56259..56540 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| R4T23_RS24195 (R4T23_24190) | 56537..57163 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| R4T23_RS24200 (R4T23_24195) | 57147..58064 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| R4T23_RS24205 (R4T23_24200) | 58064..59377 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| R4T23_RS24210 (R4T23_24205) | 59374..59952 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| R4T23_RS24215 (R4T23_24210) | 59956..60348 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| R4T23_RS24220 (R4T23_24215) | 60633..61895 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| R4T23_RS24225 (R4T23_24220) | 62219..63364 | + | 1146 | WP_015058212 | class C beta-lactamase CMY-6 | - |
| R4T23_RS24230 (R4T23_24225) | 63458..63991 | + | 534 | WP_001221666 | lipocalin family protein | - |
| R4T23_RS24235 (R4T23_24230) | 63988..64305 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| R4T23_RS24240 (R4T23_24235) | 64562..64927 | + | 366 | Protein_91 | LuxR family transcriptional regulator | - |