T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 28552..48400
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTX39_RS00150 | 24397..25830 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| HTX39_RS00155 | 25929..26201 | + | 273 | Protein_30 | IS1 family transposase | - |
| HTX39_RS00160 | 26212..26418 | - | 207 | WP_001749967 | hypothetical protein | - |
| HTX39_RS00165 | 26423..27070 | - | 648 | WP_015344958 | restriction endonuclease | - |
| HTX39_RS00170 | 27120..27353 | - | 234 | WP_001191790 | hypothetical protein | - |
| HTX39_RS00175 | 27467..27781 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTX39_RS00180 | 27778..28122 | - | 345 | WP_001749964 | hypothetical protein | - |
| HTX39_RS00185 | 28138..28509 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HTX39_RS00190 | 28552..29286 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| HTX39_RS00195 | 29295..29576 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HTX39_RS00200 | 29586..29879 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| HTX39_RS00205 | 29929..30246 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HTX39_RS00210 | 30246..32846 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HTX39_RS00215 | 32864..33577 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| HTX39_RS00220 | 33585..33812 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| HTX39_RS00225 | 33828..34868 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| HTX39_RS00230 | 34939..35097 | + | 159 | WP_012561180 | hypothetical protein | - |
| HTX39_RS00235 | 35087..35785 | + | 699 | WP_000646594 | virB8 family protein | virB8 |
| HTX39_RS00240 | 35796..36680 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HTX39_RS00245 | 36680..37840 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| HTX39_RS00250 | 37882..38877 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTX39_RS00255 | 38877..39410 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| HTX39_RS00400 | 39584..40036 | - | 453 | WP_001749956 | DUF6710 family protein | - |
| HTX39_RS00265 | 40347..40589 | + | 243 | WP_000844627 | transposase | - |
| HTX39_RS00270 | 40621..41271 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HTX39_RS00275 | 41377..42576 | + | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| HTX39_RS00280 | 42608..43261 | - | 654 | Protein_55 | EamA family transporter | - |
| HTX39_RS00285 | 43456..43629 | - | 174 | WP_001749978 | hypothetical protein | - |
| HTX39_RS00290 | 43629..46871 | - | 3243 | WP_001749977 | MobF family relaxase | - |
| HTX39_RS00295 | 46871..48400 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HTX39_RS00300 | 48402..48818 | - | 417 | WP_001749975 | hypothetical protein | - |
| HTX39_RS00405 | 49309..49728 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| HTX39_RS00310 | 49737..50453 | + | 717 | WP_001749973 | StbB family protein | - |
| HTX39_RS00315 | 50455..50823 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| HTX39_RS00320 | 51005..51349 | + | 345 | WP_000999874 | hypothetical protein | - |
| HTX39_RS00325 | 51460..51780 | - | 321 | WP_001749971 | protein CcgAII | - |
| HTX39_RS00330 | 51835..52014 | - | 180 | WP_000214483 | protein CcgAI | - |
| HTX39_RS00335 | 52741..53250 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |